Sune Darkner
Lektor
Image Analysis, Computational Modelling and Geometry
Universitetsparken 1
2100 København Ø
- 2024
- Udgivet
An Automatic DWI/FLAIR Mismatch Assessment of Stroke Patients
Johansen, Jacob, Offersen, C. M., Carlsen, Jonathan Frederik, Ingala, S., Hansen, Adam Espe, Nielsen, Michael Bachmann, Darkner, Sune & Pai, A., 2024, I: Diagnostics. 14, 1, 12 s., 69.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- 2023
- Udgivet
Collision-constrained deformable image registration framework for discontinuity management
Alscher, Thomas Michael, Erleben, Kenny & Darkner, Sune, 2023, I: PLoS ONE. 18, 8, 15 s., e0290243.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- Udgivet
Performance and Agreement When Annotating Chest X-ray Text Reports - A Preliminary Step in the Development of a Deep Learning-Based Prioritization and Detection System
Li, D., Pehrson, Lea Marie, Bonnevie, R., Fraccaro, M., Thrane, J., Tøttrup, L., Lauridsen, C. A., Balaganeshan, Sedrah Butt, Jankovic, J., Andersen, T. T., Mayar, A., Hansen, Kristoffer Lindskov, Carlsen, Jonathan Frederik, Darkner, Sune & Nielsen, Michael Bachmann, 2023, I: Diagnostics. 13, 6, 24 s.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- Udgivet
- Udgivet
cRedAnno+: Annotation Exploitation In Self-Explanatory Lung Nodule Diagnosis
Lu, J., Yin, C., Erleben, Kenny, Nielsen, Michael Bachmann & Darkner, Sune, 2023, 2023 IEEE International Symposium on Biomedical Imaging, ISBI 2023. IEEE Computer Society Press, (Proceedings - International Symposium on Biomedical Imaging, Bind 2023-April).Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- Udgivet
Pseudo-Label Guided Image Synthesis for Semi-Supervised COVID-19 Pneumonia Infection Segmentation
Lyu, F., Ye, M., Carlsen, J. F., Erleben, Kenny, Darkner, Sune & Yuen, P. C., 2023, I: IEEE Transactions on Medical Imaging. 42, 3, s. 797-809Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- Udgivet
Deep Learning-Assisted Localisation of Nanoparticles in synthetically generated two-photon microscopy images
Netterstrøm, R., Kutuzov, Nikolay, Darkner, Sune, Pallesen, M. J., Lauritzen, Martin, Erleben, Kenny & Lauze, Francois Bernard, 2023, arXiv.org, 1 s.Publikation: Working paper › Preprint › Forskning
- Udgivet
A hybrid approach to full-scale reconstruction of renal arterial network
Xu, Peidi, von Holstein-Rathlou, Niels-Henrik, Søgaard, S. B., Gundlach, C., Sørensen, Charlotte Mehlin, Erleben, Kenny, Sosnovtseva, Olga & Darkner, Sune, 9 maj 2023, I: Scientific Reports. 13, 1, 15 s., 7569.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- Udgivet
Deep-learning-based segmentation of individual tooth and bone with periodontal ligament interface details for simulation purposes
Xu, Peidi, Gholamalizadeh, T., Moshfeghifar, Faezeh, Darkner, Sune & Erleben, Kenny, 2023, I: IEEE Access. 11, s. 102460-102470Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- Udgivet
Extremely Weakly-Supervised Blood Vessel Segmentation with Physiologically Based Synthesis and Domain Adaptation
Xu, Peidi, Lee, B., Sosnovtseva, Olga, Sørensen, Charlotte Mehlin, Erleben, Kenny & Darkner, Sune, 2023, Medical Image Learning with Limited and Noisy Data - 2nd International Workshop, MILLanD 2023, Held in Conjunction with MICCAI 2023, Proceedings. Xue, Z., Antani, S., Zamzmi, G., Yang, F., Rajaraman, S., Liang, Z., Huang, S. X. & Linguraru, M. G. (red.). Springer, s. 191-201 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 14307 LNCS).Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- 2022
- Udgivet
Revisiting Transformer-based Models for Long Document Classification
Dai, X., Chalkidis, Ilias, Darkner, Sune & Elliott, Desmond, 2022, Findings of the Association for Computational Linguistics: EMNLP 2022. Association for Computational Linguistics, s. 7212–7230Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- Udgivet
Open-Full-Jaw: An open-access dataset and pipeline for finite element models of human jaw
Gholamalizadeh, T., Moshfeghifar, Faezeh, Ferguson, Z., Schneider, T., Panozzo, D., Darkner, Sune, Makaremi, M., Chan, F., Lempel Søndergaard, P. & Erleben, Kenny, 1 sep. 2022, I: Computer Methods and Programs in Biomedicine. 224, 17 s., 107009.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- Udgivet
Information-Theoretic Registration with Explicit Reorientation of Diffusion-Weighted Images
Jensen, H. G., Lauze, Francois Bernard & Darkner, Sune, 2022, I: Journal of Mathematical Imaging and Vision. 64, s. 1-16Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- Udgivet
Inter- and Intra-Observer Agreement When Using a Diagnostic Labeling Scheme for Annotating Findings on Chest X-rays—An Early Step in the Development of a Deep Learning-Based Decision Support System
Li, D., Pehrson, Lea Marie, Tøttrup, L., Fraccaro, M., Bonnevie, R., Thrane, J., Sørensen, P. J., Rykkje, A., Andersen, T. T., Steglich-Arnholm, H., Stærk, D. M. R., Borgwardt, L., Hansen, Kristoffer Lindskov, Darkner, Sune, Carlsen, Jonathan Frederik & Nielsen, Michael Bachmann, 2022, I: Diagnostics. 12, 12, 3112.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- Udgivet
Bundle geodesic convolutional neural network for diffusion-weighted imaging segmentation
Liu, Renfei, Lauze, Francois Bernard, Erleben, Kenny, Berg, Rune W. & Darkner, Sune, 2022, I: Journal of Medical Imaging. 9, 6, 14 s., 064002.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- Udgivet
Reducing Annotation Need in Self-explanatory Models for Lung Nodule Diagnosis
Lu, J., Yin, C., Krause, Oswin, Erleben, Kenny, Nielsen, Michael Bachmann & Darkner, Sune, 2022, Interpretability of Machine Intelligence in Medical Image Computing. Reyes, M., Abreu, PH. & Cardoso, J. (red.). Springer, s. 33-43 (Lecture Notes in Computer Science, Bind 13611).Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- Udgivet
Fast Vortex Particle Method for Fluid-Character Interaction
Meldgaard, A., Darkner, Sune & Erleben, Kenny, 2022, I: OpenReview.net. 2022, 7 s.Publikation: Bidrag til tidsskrift › Konferenceartikel
- Udgivet
A Direct Geometry Processing Cartilage Generation Method Using Segmented Bone Models from Datasets with Poor Cartilage Visibility
Moshfeghifar, Faezeh, Nielsen, M. K., Tascon Vidarte, J. D., Darkner, Sune & Erleben, Kenny, 2022, Computational Biomechanics for Medicine: Towards Translation and Better Patient Outcomes. Springer, s. 155.169Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- Udgivet
LibHip: An open-access hip joint model repository suitable for finite element method simulation
Moshfeghifar, Faezeh, Gholamalizadeh, T., Ferguson, Z., Schneider, T., Nielsen, Michael Bachmann, Panozzo, D., Darkner, Sune & Erleben, Kenny, 2022, I: Computer Methods and Programs in Biomedicine. 226, 14 s., 107140.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- Udgivet
RootPainter3D: Interactive-machine-learning enables rapid and accurate contouring for radiotherapy
Smith, Abraham George, Petersen, Jens, Terrones-Campos, C., Berthelsen, A. K., Forbes, N. J., Darkner, Sune, Specht, Lena & Vogelius, I. R., 2022, I: Medical Physics. 49, 1, s. 461-473Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- Udgivet
An algebra for local histograms
Sporring, Jon & Darkner, Sune, 2022, I: Frontiers in Computer Science. 4, s. 1-9 939563.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- Udgivet
Reconstructing Binary Signals from Local Histograms
Sporring, Jon & Darkner, Sune, 21 mar. 2022, I: Entropy. 24, 3, s. 1-11 433.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- Udgivet
Accuracy and consistency of intensity-based deformable image registration in 4DCT for tumor motion estimation in liver radiotherapy planning
Tascon-Vidarte, J. D., Stick, L. B., Josipovic, Mirjana, Risum, S., Jomier, J., Erleben, Kenny, Vogelius, Ivan R. & Darkner, Sune, jul. 2022, I: PLoS ONE. 17, 7 July, s. 1-15 e0271064.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
- Udgivet
Auto-segmentation of Hip Joints Using MultiPlanar UNet with Transfer Learning
Xu, Peidi, Moshfeghifar, Faezeh, Gholamalizadeh, T., Nielsen, Michael Bachmann, Erleben, Kenny & Darkner, Sune, 2022, Medical Image Learning with Limited and Noisy Data: First International Workshop, MILLanD 2022 Held in Conjunction with MICCAI 2022 Singapore, September 22, 2022 Proceedings. Zamzmi, G., Antani, S., Rajaraman, S., Xue, Z., Bagci, U. & Linguraru, M. G. (red.). Springer Science and Business Media Deutschland GmbH, s. 153-162 10 s. (Medical Image Learning with Limited and Noisy Data, Bind 13559).Publikation: Bidrag til bog/antologi/rapport › Konferencebidrag i proceedings › Forskning › fagfællebedømt
- 2021
- Udgivet
Contact modeling from images using cut finite element solvers
Claus, S., Kerfriden, P., Moshfeghifar, Faezeh, Darkner, Sune, Erleben, Kenny & Wong, Christian, 2021, I: Advanced Modeling and Simulation in Engineering Sciences. 8, 1, s. 1-23 13.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › fagfællebedømt
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FDG-PET template MNI152 1mm
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