Standard
Worldwide diversity of endophytic fungi and insects associated with dormant tree twigs. / Franić, Iva; Prospero, Simone; Adamson, Kalev; Allan, Eric; Attorre, Fabio; Auger-Rozenberg, Marie Anne; Augustin, Sylvie; Avtzis, Dimitrios; Baert, Wim; Barta, Marek; Bauters, Kenneth; Bellahirech, Amani; Boroń, Piotr; Bragança, Helena; Brestovanská, Tereza; Brurberg, May Bente; Burgess, Treena; Burokienė, Daiva; Cleary, Michelle; Corley, Juan; Coyle, David R.; Csóka, György; Černý, Karel; Davydenko, Kateryna; de Groot, Maarten; Diez, Julio Javier; Doğmuş Lehtijärvi, H. Tuğba; Drenkhan, Rein; Edwards, Jacqueline; Elsafy, Mohammed; Eötvös, Csaba Béla; Falko, Roman; Fan, Jianting; Feddern, Nina; Fürjes-Mikó, Ágnes; Gossner, Martin M.; Grad, Bartłomiej; Hartmann, Martin; Havrdova, Ludmila; Horáková, Miriam Kádasi; Hrabětová, Markéta; Justesen, Mathias Just; Kacprzyk, Magdalena; Kenis, Marc; Kirichenko, Natalia; Kovač, Marta; Kramarets, Volodymyr; Lacković, Nikola; Lantschner, Maria Victoria; Lazarević, Jelena; Leskiv, Marianna; Li, Hongmei; Madsen, Corrie Lynne; Malumphy, Chris; Matošević, Dinka; Matsiakh, Iryna; May, Tom W.; Meffert, Johan; Migliorini, Duccio; Nikolov, Christo; O’Hanlon, Richard; Oskay, Funda; Paap, Trudy; Parpan, Taras; Piškur, Barbara; Ravn, Hans Peter; Richard, John; Ronse, Anne; Roques, Alain; Ruffner, Beat; Sivickis, Karolis; Soliani, Carolina; Talgø, Venche; Tomoshevich, Maria; Uimari, Anne; Ulyshen, Michael; Vettraino, Anna Maria; Villari, Caterina; Wang, Yongjun; Witzell, Johanna; Zlatković, Milica; Eschen, René.
I:
Scientific Data, Bind 9, Nr. 1, 62, 2022.
Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
Harvard
Franić, I, Prospero, S, Adamson, K, Allan, E, Attorre, F, Auger-Rozenberg, MA, Augustin, S, Avtzis, D, Baert, W, Barta, M, Bauters, K, Bellahirech, A, Boroń, P, Bragança, H, Brestovanská, T, Brurberg, MB, Burgess, T, Burokienė, D, Cleary, M, Corley, J, Coyle, DR, Csóka, G, Černý, K, Davydenko, K, de Groot, M, Diez, JJ, Doğmuş Lehtijärvi, HT, Drenkhan, R, Edwards, J, Elsafy, M, Eötvös, CB, Falko, R, Fan, J, Feddern, N, Fürjes-Mikó, Á, Gossner, MM, Grad, B, Hartmann, M, Havrdova, L, Horáková, MK, Hrabětová, M
, Justesen, MJ, Kacprzyk, M, Kenis, M, Kirichenko, N, Kovač, M, Kramarets, V, Lacković, N, Lantschner, MV, Lazarević, J, Leskiv, M, Li, H, Madsen, CL, Malumphy, C, Matošević, D, Matsiakh, I, May, TW, Meffert, J, Migliorini, D, Nikolov, C, O’Hanlon, R, Oskay, F, Paap, T, Parpan, T, Piškur, B
, Ravn, HP, Richard, J, Ronse, A, Roques, A, Ruffner, B, Sivickis, K, Soliani, C, Talgø, V, Tomoshevich, M, Uimari, A, Ulyshen, M, Vettraino, AM, Villari, C, Wang, Y, Witzell, J, Zlatković, M & Eschen, R 2022, '
Worldwide diversity of endophytic fungi and insects associated with dormant tree twigs',
Scientific Data, bind 9, nr. 1, 62.
https://doi.org/10.1038/s41597-022-01162-3
APA
Franić, I., Prospero, S., Adamson, K., Allan, E., Attorre, F., Auger-Rozenberg, M. A., Augustin, S., Avtzis, D., Baert, W., Barta, M., Bauters, K., Bellahirech, A., Boroń, P., Bragança, H., Brestovanská, T., Brurberg, M. B., Burgess, T., Burokienė, D., Cleary, M., ... Eschen, R. (2022).
Worldwide diversity of endophytic fungi and insects associated with dormant tree twigs.
Scientific Data,
9(1), [62].
https://doi.org/10.1038/s41597-022-01162-3
Vancouver
Franić I, Prospero S, Adamson K, Allan E, Attorre F, Auger-Rozenberg MA o.a.
Worldwide diversity of endophytic fungi and insects associated with dormant tree twigs.
Scientific Data. 2022;9(1). 62.
https://doi.org/10.1038/s41597-022-01162-3
Author
Franić, Iva ; Prospero, Simone ; Adamson, Kalev ; Allan, Eric ; Attorre, Fabio ; Auger-Rozenberg, Marie Anne ; Augustin, Sylvie ; Avtzis, Dimitrios ; Baert, Wim ; Barta, Marek ; Bauters, Kenneth ; Bellahirech, Amani ; Boroń, Piotr ; Bragança, Helena ; Brestovanská, Tereza ; Brurberg, May Bente ; Burgess, Treena ; Burokienė, Daiva ; Cleary, Michelle ; Corley, Juan ; Coyle, David R. ; Csóka, György ; Černý, Karel ; Davydenko, Kateryna ; de Groot, Maarten ; Diez, Julio Javier ; Doğmuş Lehtijärvi, H. Tuğba ; Drenkhan, Rein ; Edwards, Jacqueline ; Elsafy, Mohammed ; Eötvös, Csaba Béla ; Falko, Roman ; Fan, Jianting ; Feddern, Nina ; Fürjes-Mikó, Ágnes ; Gossner, Martin M. ; Grad, Bartłomiej ; Hartmann, Martin ; Havrdova, Ludmila ; Horáková, Miriam Kádasi ; Hrabětová, Markéta ; Justesen, Mathias Just ; Kacprzyk, Magdalena ; Kenis, Marc ; Kirichenko, Natalia ; Kovač, Marta ; Kramarets, Volodymyr ; Lacković, Nikola ; Lantschner, Maria Victoria ; Lazarević, Jelena ; Leskiv, Marianna ; Li, Hongmei ; Madsen, Corrie Lynne ; Malumphy, Chris ; Matošević, Dinka ; Matsiakh, Iryna ; May, Tom W. ; Meffert, Johan ; Migliorini, Duccio ; Nikolov, Christo ; O’Hanlon, Richard ; Oskay, Funda ; Paap, Trudy ; Parpan, Taras ; Piškur, Barbara ; Ravn, Hans Peter ; Richard, John ; Ronse, Anne ; Roques, Alain ; Ruffner, Beat ; Sivickis, Karolis ; Soliani, Carolina ; Talgø, Venche ; Tomoshevich, Maria ; Uimari, Anne ; Ulyshen, Michael ; Vettraino, Anna Maria ; Villari, Caterina ; Wang, Yongjun ; Witzell, Johanna ; Zlatković, Milica ; Eschen, René. / Worldwide diversity of endophytic fungi and insects associated with dormant tree twigs. I: Scientific Data. 2022 ; Bind 9, Nr. 1.
Bibtex
@article{f674ade4f82a47238b2e426a1a88ba17,
title = "Worldwide diversity of endophytic fungi and insects associated with dormant tree twigs",
abstract = "International trade in plants and climate change are two of the main factors causing damaging tree pests (i.e. fungi and insects) to spread into new areas. To mitigate these risks, a large-scale assessment of tree-associated fungi and insects is needed. We present records of endophytic fungi and insects in twigs of 17 angiosperm and gymnosperm genera, from 51 locations in 32 countries worldwide. Endophytic fungi were characterized by high-throughput sequencing of 352 samples from 145 tree species in 28 countries. Insects were reared from 227 samples of 109 tree species in 18 countries and sorted into taxonomic orders and feeding guilds. Herbivorous insects were grouped into morphospecies and were identified using molecular and morphological approaches. This dataset reveals the diversity of tree-associated taxa, as it contains 12,721 fungal Amplicon Sequence Variants and 208 herbivorous insect morphospecies, sampled across broad geographic and climatic gradients and for many tree species. This dataset will facilitate applied and fundamental studies on the distribution of fungal endophytes and insects in trees.",
author = "Iva Frani{\'c} and Simone Prospero and Kalev Adamson and Eric Allan and Fabio Attorre and Auger-Rozenberg, {Marie Anne} and Sylvie Augustin and Dimitrios Avtzis and Wim Baert and Marek Barta and Kenneth Bauters and Amani Bellahirech and Piotr Boro{\'n} and Helena Bragan{\c c}a and Tereza Brestovansk{\'a} and Brurberg, {May Bente} and Treena Burgess and Daiva Burokienė and Michelle Cleary and Juan Corley and Coyle, {David R.} and Gy{\"o}rgy Cs{\'o}ka and Karel {\v C}ern{\'y} and Kateryna Davydenko and {de Groot}, Maarten and Diez, {Julio Javier} and {Doğmu{\c s} Lehtij{\"a}rvi}, {H. Tuğba} and Rein Drenkhan and Jacqueline Edwards and Mohammed Elsafy and E{\"o}tv{\"o}s, {Csaba B{\'e}la} and Roman Falko and Jianting Fan and Nina Feddern and {\'A}gnes F{\"u}rjes-Mik{\'o} and Gossner, {Martin M.} and Bart{\l}omiej Grad and Martin Hartmann and Ludmila Havrdova and Hor{\'a}kov{\'a}, {Miriam K{\'a}dasi} and Mark{\'e}ta Hrab{\v e}tov{\'a} and Justesen, {Mathias Just} and Magdalena Kacprzyk and Marc Kenis and Natalia Kirichenko and Marta Kova{\v c} and Volodymyr Kramarets and Nikola Lackovi{\'c} and Lantschner, {Maria Victoria} and Jelena Lazarevi{\'c} and Marianna Leskiv and Hongmei Li and Madsen, {Corrie Lynne} and Chris Malumphy and Dinka Mato{\v s}evi{\'c} and Iryna Matsiakh and May, {Tom W.} and Johan Meffert and Duccio Migliorini and Christo Nikolov and Richard O{\textquoteright}Hanlon and Funda Oskay and Trudy Paap and Taras Parpan and Barbara Pi{\v s}kur and Ravn, {Hans Peter} and John Richard and Anne Ronse and Alain Roques and Beat Ruffner and Karolis Sivickis and Carolina Soliani and Venche Talg{\o} and Maria Tomoshevich and Anne Uimari and Michael Ulyshen and Vettraino, {Anna Maria} and Caterina Villari and Yongjun Wang and Johanna Witzell and Milica Zlatkovi{\'c} and Ren{\'e} Eschen",
note = "Funding Information: We gratefully acknowledge the financial support of the Swiss National Science Foundation (Project C15.0081) grant number 174644 and the Swiss Federal Office for the Environment (Grant 00.0418.PZ/ P193-1077). This work was supported by COST Action “Global Warning” (FP1401). CABI is an international intergovernmental organisation, and R.E., M.K., H.L. and I.F. gratefully acknowledge the core financial support from our member countries (and lead agencies) including the United Kingdom (Foreign, Commonwealth & Development Office), China (Chinese Ministry of Agriculture and Rural Affairs), Australia (Australian Centre for International Agricultural Research), Canada (Agriculture and Agri-Food Canada), Netherlands (Directorate General for International Cooperation), and Switzerland (Swiss Agency for Development and Cooperation). See https://www.cabi.org/aboutcabi/who-we-work-with/key-donors/ for full details. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. M.B. and M.K.H. were financially supported by the Slovak Research and Development Agency (Project APVV-19-0116). H.B. would like to thank the botanist Jorge Capelo who helped with Myrtaceae identification and INIAV IP for supporting her contribution to this study. Contributions of M. de G. and B.P. were financed through Slovenian Research Agency (P4-0107) and by the Slovenian Ministry of Agriculture, Forestry and Food (Public Forestry Service). G.C, C.B.E. and A.F.M. were supported by OTKA 128008 research grant provided by the National Research, Development and Innovation Office. Contributions of K.A. and R.D. were supported by the Estonian Science Foundation grant PSG136. M.J.J., C.L.M. and H.P.R. were financially supported by the 15. Juni Fonden (Grant 2017-N-123). P.B., B.G. and M.Ka. were financially supported by the Ministry of Science and Higher Education of the Republic of Poland for the University of Agriculture in Krakow (SUB/040013-D019). C.N. was financially supported by the Slovak Research and Development Agency (Grant APVV-15-0531). N.K. was partially supported by Russian Foundation for Basic Research (Grants 15-29-02645, 19-04-01029). R.OH. was supported by funding from DAERA, and assistance from David Craig, AFBI. T.P. thanks the South African Department of Forestry, Fisheries and the Environment (DFFE) for funding noting that this publication does not necessarily represent the views or opinions of DFFE or its employees. In preparing the publication, materials of the bioresource scientific collection of the CSBG SB RAS “Collections of living plants indoors and outdoors” USU_440534 (Novosibirsk, Russia) were used. M.Z. was financially supported by Ministry of education, science and technological development of the Republic of Serbia (Contract 451-03-68/2020-14/200197). We acknowledge the Genetic Diversity Centre (GDC) at ETH Zurich for providing computational infrastructure and acknowledge the contribution of McGill University and G{\'e}nome Qu{\'e}bec Innovation Center (Montr{\'e}al, Quebec, Canada) for pair-end sequencing on Illumina MiSeq. Publisher Copyright: {\textcopyright} 2022, The Author(s).",
year = "2022",
doi = "10.1038/s41597-022-01162-3",
language = "English",
volume = "9",
journal = "Scientific data",
issn = "2052-4463",
publisher = "nature publishing group",
number = "1",
}
RIS
TY - JOUR
T1 - Worldwide diversity of endophytic fungi and insects associated with dormant tree twigs
AU - Franić, Iva
AU - Prospero, Simone
AU - Adamson, Kalev
AU - Allan, Eric
AU - Attorre, Fabio
AU - Auger-Rozenberg, Marie Anne
AU - Augustin, Sylvie
AU - Avtzis, Dimitrios
AU - Baert, Wim
AU - Barta, Marek
AU - Bauters, Kenneth
AU - Bellahirech, Amani
AU - Boroń, Piotr
AU - Bragança, Helena
AU - Brestovanská, Tereza
AU - Brurberg, May Bente
AU - Burgess, Treena
AU - Burokienė, Daiva
AU - Cleary, Michelle
AU - Corley, Juan
AU - Coyle, David R.
AU - Csóka, György
AU - Černý, Karel
AU - Davydenko, Kateryna
AU - de Groot, Maarten
AU - Diez, Julio Javier
AU - Doğmuş Lehtijärvi, H. Tuğba
AU - Drenkhan, Rein
AU - Edwards, Jacqueline
AU - Elsafy, Mohammed
AU - Eötvös, Csaba Béla
AU - Falko, Roman
AU - Fan, Jianting
AU - Feddern, Nina
AU - Fürjes-Mikó, Ágnes
AU - Gossner, Martin M.
AU - Grad, Bartłomiej
AU - Hartmann, Martin
AU - Havrdova, Ludmila
AU - Horáková, Miriam Kádasi
AU - Hrabětová, Markéta
AU - Justesen, Mathias Just
AU - Kacprzyk, Magdalena
AU - Kenis, Marc
AU - Kirichenko, Natalia
AU - Kovač, Marta
AU - Kramarets, Volodymyr
AU - Lacković, Nikola
AU - Lantschner, Maria Victoria
AU - Lazarević, Jelena
AU - Leskiv, Marianna
AU - Li, Hongmei
AU - Madsen, Corrie Lynne
AU - Malumphy, Chris
AU - Matošević, Dinka
AU - Matsiakh, Iryna
AU - May, Tom W.
AU - Meffert, Johan
AU - Migliorini, Duccio
AU - Nikolov, Christo
AU - O’Hanlon, Richard
AU - Oskay, Funda
AU - Paap, Trudy
AU - Parpan, Taras
AU - Piškur, Barbara
AU - Ravn, Hans Peter
AU - Richard, John
AU - Ronse, Anne
AU - Roques, Alain
AU - Ruffner, Beat
AU - Sivickis, Karolis
AU - Soliani, Carolina
AU - Talgø, Venche
AU - Tomoshevich, Maria
AU - Uimari, Anne
AU - Ulyshen, Michael
AU - Vettraino, Anna Maria
AU - Villari, Caterina
AU - Wang, Yongjun
AU - Witzell, Johanna
AU - Zlatković, Milica
AU - Eschen, René
N1 - Funding Information:
We gratefully acknowledge the financial support of the Swiss National Science Foundation (Project C15.0081) grant number 174644 and the Swiss Federal Office for the Environment (Grant 00.0418.PZ/ P193-1077). This work was supported by COST Action “Global Warning” (FP1401). CABI is an international intergovernmental organisation, and R.E., M.K., H.L. and I.F. gratefully acknowledge the core financial support from our member countries (and lead agencies) including the United Kingdom (Foreign, Commonwealth & Development Office), China (Chinese Ministry of Agriculture and Rural Affairs), Australia (Australian Centre for International Agricultural Research), Canada (Agriculture and Agri-Food Canada), Netherlands (Directorate General for International Cooperation), and Switzerland (Swiss Agency for Development and Cooperation). See https://www.cabi.org/aboutcabi/who-we-work-with/key-donors/ for full details. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. M.B. and M.K.H. were financially supported by the Slovak Research and Development Agency (Project APVV-19-0116). H.B. would like to thank the botanist Jorge Capelo who helped with Myrtaceae identification and INIAV IP for supporting her contribution to this study. Contributions of M. de G. and B.P. were financed through Slovenian Research Agency (P4-0107) and by the Slovenian Ministry of Agriculture, Forestry and Food (Public Forestry Service). G.C, C.B.E. and A.F.M. were supported by OTKA 128008 research grant provided by the National Research, Development and Innovation Office. Contributions of K.A. and R.D. were supported by the Estonian Science Foundation grant PSG136. M.J.J., C.L.M. and H.P.R. were financially supported by the 15. Juni Fonden (Grant 2017-N-123). P.B., B.G. and M.Ka. were financially supported by the Ministry of Science and Higher Education of the Republic of Poland for the University of Agriculture in Krakow (SUB/040013-D019). C.N. was financially supported by the Slovak Research and Development Agency (Grant APVV-15-0531). N.K. was partially supported by Russian Foundation for Basic Research (Grants 15-29-02645, 19-04-01029). R.OH. was supported by funding from DAERA, and assistance from David Craig, AFBI. T.P. thanks the South African Department of Forestry, Fisheries and the Environment (DFFE) for funding noting that this publication does not necessarily represent the views or opinions of DFFE or its employees. In preparing the publication, materials of the bioresource scientific collection of the CSBG SB RAS “Collections of living plants indoors and outdoors” USU_440534 (Novosibirsk, Russia) were used. M.Z. was financially supported by Ministry of education, science and technological development of the Republic of Serbia (Contract 451-03-68/2020-14/200197). We acknowledge the Genetic Diversity Centre (GDC) at ETH Zurich for providing computational infrastructure and acknowledge the contribution of McGill University and Génome Québec Innovation Center (Montréal, Quebec, Canada) for pair-end sequencing on Illumina MiSeq.
Publisher Copyright:
© 2022, The Author(s).
PY - 2022
Y1 - 2022
N2 - International trade in plants and climate change are two of the main factors causing damaging tree pests (i.e. fungi and insects) to spread into new areas. To mitigate these risks, a large-scale assessment of tree-associated fungi and insects is needed. We present records of endophytic fungi and insects in twigs of 17 angiosperm and gymnosperm genera, from 51 locations in 32 countries worldwide. Endophytic fungi were characterized by high-throughput sequencing of 352 samples from 145 tree species in 28 countries. Insects were reared from 227 samples of 109 tree species in 18 countries and sorted into taxonomic orders and feeding guilds. Herbivorous insects were grouped into morphospecies and were identified using molecular and morphological approaches. This dataset reveals the diversity of tree-associated taxa, as it contains 12,721 fungal Amplicon Sequence Variants and 208 herbivorous insect morphospecies, sampled across broad geographic and climatic gradients and for many tree species. This dataset will facilitate applied and fundamental studies on the distribution of fungal endophytes and insects in trees.
AB - International trade in plants and climate change are two of the main factors causing damaging tree pests (i.e. fungi and insects) to spread into new areas. To mitigate these risks, a large-scale assessment of tree-associated fungi and insects is needed. We present records of endophytic fungi and insects in twigs of 17 angiosperm and gymnosperm genera, from 51 locations in 32 countries worldwide. Endophytic fungi were characterized by high-throughput sequencing of 352 samples from 145 tree species in 28 countries. Insects were reared from 227 samples of 109 tree species in 18 countries and sorted into taxonomic orders and feeding guilds. Herbivorous insects were grouped into morphospecies and were identified using molecular and morphological approaches. This dataset reveals the diversity of tree-associated taxa, as it contains 12,721 fungal Amplicon Sequence Variants and 208 herbivorous insect morphospecies, sampled across broad geographic and climatic gradients and for many tree species. This dataset will facilitate applied and fundamental studies on the distribution of fungal endophytes and insects in trees.
U2 - 10.1038/s41597-022-01162-3
DO - 10.1038/s41597-022-01162-3
M3 - Journal article
C2 - 35232978
AN - SCOPUS:85125568454
VL - 9
JO - Scientific data
JF - Scientific data
SN - 2052-4463
IS - 1
M1 - 62
ER -