Dissecting the genome of star fruit (Averrhoa carambola L.)
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Dissecting the genome of star fruit (Averrhoa carambola L.). / Fan, Yannan; Sahu, Sunil Kumar; Yang, Ting; Mu, Weixue; Wei, Jinpu; Cheng, Le; Yang, Jinlong; Mu, Ranchang; Liu, Jie; Zhao, Jianming; Zhao, Yuxian; Xu, Xun; Liu, Xin; Liu, Huan.
I: Horticulture Research, Bind 7, 94, 2020.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
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TY - JOUR
T1 - Dissecting the genome of star fruit (Averrhoa carambola L.)
AU - Fan, Yannan
AU - Sahu, Sunil Kumar
AU - Yang, Ting
AU - Mu, Weixue
AU - Wei, Jinpu
AU - Cheng, Le
AU - Yang, Jinlong
AU - Mu, Ranchang
AU - Liu, Jie
AU - Zhao, Jianming
AU - Zhao, Yuxian
AU - Xu, Xun
AU - Liu, Xin
AU - Liu, Huan
PY - 2020
Y1 - 2020
N2 - Averrhoa carambola is commonly known as star fruit because of its peculiar shape, and its fruit is a rich source of minerals and vitamins. It is also used in traditional medicines in countries such as India, China, the Philippines, and Brazil for treating various ailments, including fever, diarrhea, vomiting, and skin disease. Here, we present the first draft genome of the Oxalidaceae family, with an assembled genome size of 470.51 Mb. In total, 24,726 protein-coding genes were identified, and 16,490 genes were annotated using various well-known databases. The phylogenomic analysis confirmed the evolutionary position of the Oxalidaceae family. Based on the gene functional annotations, we also identified enzymes that may be involved in important nutritional pathways in the star fruit genome. Overall, the data from this first sequenced genome in the Oxalidaceae family provide an essential resource for nutritional, medicinal, and cultivational studies of the economically important star-fruit plant.
AB - Averrhoa carambola is commonly known as star fruit because of its peculiar shape, and its fruit is a rich source of minerals and vitamins. It is also used in traditional medicines in countries such as India, China, the Philippines, and Brazil for treating various ailments, including fever, diarrhea, vomiting, and skin disease. Here, we present the first draft genome of the Oxalidaceae family, with an assembled genome size of 470.51 Mb. In total, 24,726 protein-coding genes were identified, and 16,490 genes were annotated using various well-known databases. The phylogenomic analysis confirmed the evolutionary position of the Oxalidaceae family. Based on the gene functional annotations, we also identified enzymes that may be involved in important nutritional pathways in the star fruit genome. Overall, the data from this first sequenced genome in the Oxalidaceae family provide an essential resource for nutritional, medicinal, and cultivational studies of the economically important star-fruit plant.
U2 - 10.1038/s41438-020-0306-4
DO - 10.1038/s41438-020-0306-4
M3 - Journal article
C2 - 32528706
AN - SCOPUS:85085752673
VL - 7
JO - Horticulture Research
JF - Horticulture Research
SN - 2662-6810
M1 - 94
ER -
ID: 243193087