A method for independent component graph analysis of resting-state fMRI

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

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A method for independent component graph analysis of resting-state fMRI. / de Paula, Demetrius Ribeiro; Ziegler, Erik; Abeyasinghe, Pubuditha M.; Das, Tushar K.; Cavaliere, Carlo; Aiello, Marco; Heine, Lizette; di Perri, Carol; Demertzi, Athena; Noirhomme, Quentin; Charland-Verville, Vanessa; Vanhaudenhuyse, Audrey; Stender, Johan; Gomez, Francisco; Tshibanda, Jean-Flory L.; Laureys, Steven; Owen, Adrian M.; Soddu, Andrea.

I: Brain and Behavior, Bind 7, Nr. 3, e00626, 2017.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

Harvard

de Paula, DR, Ziegler, E, Abeyasinghe, PM, Das, TK, Cavaliere, C, Aiello, M, Heine, L, di Perri, C, Demertzi, A, Noirhomme, Q, Charland-Verville, V, Vanhaudenhuyse, A, Stender, J, Gomez, F, Tshibanda, J-FL, Laureys, S, Owen, AM & Soddu, A 2017, 'A method for independent component graph analysis of resting-state fMRI', Brain and Behavior, bind 7, nr. 3, e00626. https://doi.org/10.1002/brb3.626

APA

de Paula, D. R., Ziegler, E., Abeyasinghe, P. M., Das, T. K., Cavaliere, C., Aiello, M., Heine, L., di Perri, C., Demertzi, A., Noirhomme, Q., Charland-Verville, V., Vanhaudenhuyse, A., Stender, J., Gomez, F., Tshibanda, J-F. L., Laureys, S., Owen, A. M., & Soddu, A. (2017). A method for independent component graph analysis of resting-state fMRI. Brain and Behavior, 7(3), [e00626]. https://doi.org/10.1002/brb3.626

Vancouver

de Paula DR, Ziegler E, Abeyasinghe PM, Das TK, Cavaliere C, Aiello M o.a. A method for independent component graph analysis of resting-state fMRI. Brain and Behavior. 2017;7(3). e00626. https://doi.org/10.1002/brb3.626

Author

de Paula, Demetrius Ribeiro ; Ziegler, Erik ; Abeyasinghe, Pubuditha M. ; Das, Tushar K. ; Cavaliere, Carlo ; Aiello, Marco ; Heine, Lizette ; di Perri, Carol ; Demertzi, Athena ; Noirhomme, Quentin ; Charland-Verville, Vanessa ; Vanhaudenhuyse, Audrey ; Stender, Johan ; Gomez, Francisco ; Tshibanda, Jean-Flory L. ; Laureys, Steven ; Owen, Adrian M. ; Soddu, Andrea. / A method for independent component graph analysis of resting-state fMRI. I: Brain and Behavior. 2017 ; Bind 7, Nr. 3.

Bibtex

@article{f460c26d7bab4f27886f4fe9c13285ae,
title = "A method for independent component graph analysis of resting-state fMRI",
abstract = "IntroductionIndependent component analysis (ICA) has been extensively used for reducing task-free BOLD fMRI recordings into spatial maps and their associated time-courses. The spatially identified independent components can be considered as intrinsic connectivity networks (ICNs) of non-contiguous regions. To date, the spatial patterns of the networks have been analyzed with techniques developed for volumetric data.ObjectiveHere, we detail a graph building technique that allows these ICNs to be analyzed with graph theory.MethodsFirst, ICA was performed at the single-subject level in 15 healthy volunteers using a 3T MRI scanner. The identification of nine networks was performed by a multiple-template matching procedure and a subsequent component classification based on the network “neuronal” properties. Second, for each of the identified networks, the nodes were defined as 1,015 anatomically parcellated regions. Third, between-node functional connectivity was established by building edge weights for each networks. Group-level graph analysis was finally performed for each network and compared to the classical network.ResultsNetwork graph comparison between the classically constructed network and the nine networks showed significant differences in the auditory and visual medial networks with regard to the average degree and the number of edges, while the visual lateral network showed a significant difference in the small-worldness.ConclusionsThis novel approach permits us to take advantage of the well-recognized power of ICA in BOLD signal decomposition and, at the same time, to make use of well-established graph measures to evaluate connectivity differences. Moreover, by providing a graph for each separate network, it can offer the possibility to extract graph measures in a specific way for each network. This increased specificity could be relevant for studying pathological brain activity or altered states of consciousness as induced by anesthesia or sleep, where specific networks are known to be altered in different strength.",
keywords = "BOLD fMRI, graph theory, independent component analysis, resting state",
author = "{de Paula}, {Demetrius Ribeiro} and Erik Ziegler and Abeyasinghe, {Pubuditha M.} and Das, {Tushar K.} and Carlo Cavaliere and Marco Aiello and Lizette Heine and {di Perri}, Carol and Athena Demertzi and Quentin Noirhomme and Vanessa Charland-Verville and Audrey Vanhaudenhuyse and Johan Stender and Francisco Gomez and Tshibanda, {Jean-Flory L.} and Steven Laureys and Owen, {Adrian M.} and Andrea Soddu",
year = "2017",
doi = "10.1002/brb3.626",
language = "English",
volume = "7",
journal = "Brain and Behavior",
issn = "2157-9032",
publisher = "JohnWiley & Sons Ltd",
number = "3",

}

RIS

TY - JOUR

T1 - A method for independent component graph analysis of resting-state fMRI

AU - de Paula, Demetrius Ribeiro

AU - Ziegler, Erik

AU - Abeyasinghe, Pubuditha M.

AU - Das, Tushar K.

AU - Cavaliere, Carlo

AU - Aiello, Marco

AU - Heine, Lizette

AU - di Perri, Carol

AU - Demertzi, Athena

AU - Noirhomme, Quentin

AU - Charland-Verville, Vanessa

AU - Vanhaudenhuyse, Audrey

AU - Stender, Johan

AU - Gomez, Francisco

AU - Tshibanda, Jean-Flory L.

AU - Laureys, Steven

AU - Owen, Adrian M.

AU - Soddu, Andrea

PY - 2017

Y1 - 2017

N2 - IntroductionIndependent component analysis (ICA) has been extensively used for reducing task-free BOLD fMRI recordings into spatial maps and their associated time-courses. The spatially identified independent components can be considered as intrinsic connectivity networks (ICNs) of non-contiguous regions. To date, the spatial patterns of the networks have been analyzed with techniques developed for volumetric data.ObjectiveHere, we detail a graph building technique that allows these ICNs to be analyzed with graph theory.MethodsFirst, ICA was performed at the single-subject level in 15 healthy volunteers using a 3T MRI scanner. The identification of nine networks was performed by a multiple-template matching procedure and a subsequent component classification based on the network “neuronal” properties. Second, for each of the identified networks, the nodes were defined as 1,015 anatomically parcellated regions. Third, between-node functional connectivity was established by building edge weights for each networks. Group-level graph analysis was finally performed for each network and compared to the classical network.ResultsNetwork graph comparison between the classically constructed network and the nine networks showed significant differences in the auditory and visual medial networks with regard to the average degree and the number of edges, while the visual lateral network showed a significant difference in the small-worldness.ConclusionsThis novel approach permits us to take advantage of the well-recognized power of ICA in BOLD signal decomposition and, at the same time, to make use of well-established graph measures to evaluate connectivity differences. Moreover, by providing a graph for each separate network, it can offer the possibility to extract graph measures in a specific way for each network. This increased specificity could be relevant for studying pathological brain activity or altered states of consciousness as induced by anesthesia or sleep, where specific networks are known to be altered in different strength.

AB - IntroductionIndependent component analysis (ICA) has been extensively used for reducing task-free BOLD fMRI recordings into spatial maps and their associated time-courses. The spatially identified independent components can be considered as intrinsic connectivity networks (ICNs) of non-contiguous regions. To date, the spatial patterns of the networks have been analyzed with techniques developed for volumetric data.ObjectiveHere, we detail a graph building technique that allows these ICNs to be analyzed with graph theory.MethodsFirst, ICA was performed at the single-subject level in 15 healthy volunteers using a 3T MRI scanner. The identification of nine networks was performed by a multiple-template matching procedure and a subsequent component classification based on the network “neuronal” properties. Second, for each of the identified networks, the nodes were defined as 1,015 anatomically parcellated regions. Third, between-node functional connectivity was established by building edge weights for each networks. Group-level graph analysis was finally performed for each network and compared to the classical network.ResultsNetwork graph comparison between the classically constructed network and the nine networks showed significant differences in the auditory and visual medial networks with regard to the average degree and the number of edges, while the visual lateral network showed a significant difference in the small-worldness.ConclusionsThis novel approach permits us to take advantage of the well-recognized power of ICA in BOLD signal decomposition and, at the same time, to make use of well-established graph measures to evaluate connectivity differences. Moreover, by providing a graph for each separate network, it can offer the possibility to extract graph measures in a specific way for each network. This increased specificity could be relevant for studying pathological brain activity or altered states of consciousness as induced by anesthesia or sleep, where specific networks are known to be altered in different strength.

KW - BOLD fMRI

KW - graph theory

KW - independent component analysis

KW - resting state

U2 - 10.1002/brb3.626

DO - 10.1002/brb3.626

M3 - Journal article

C2 - 28293468

VL - 7

JO - Brain and Behavior

JF - Brain and Behavior

SN - 2157-9032

IS - 3

M1 - e00626

ER -

ID: 182582675