A G(enomic)P(ositioning)S(ystem) for Plant RNAPII Transcription

Publikation: Bidrag til tidsskrift › Review › Forskning › fagfællebedømt

Standard

A G(enomic)P(ositioning)S(ystem) for Plant RNAPII Transcription. / Leng, Xueyuan; Thomas, Quentin; Rasmussen, Simon Horskjær; Marquardt, Sebastian.

I: Trends in Plant Science, Bind 25, Nr. 8, 2020, s. 744-764.

Publikation: Bidrag til tidsskrift › Review › Forskning › fagfællebedømt

Harvard

Leng, X, Thomas, Q, Rasmussen, SH & Marquardt, S 2020, 'A G(enomic)P(ositioning)S(ystem) for Plant RNAPII Transcription', Trends in Plant Science, bind 25, nr. 8, s. 744-764. https://doi.org/10.1016/j.tplants.2020.03.005

APA

Leng, X., Thomas, Q., Rasmussen, S. H., & Marquardt, S. (2020). A G(enomic)P(ositioning)S(ystem) for Plant RNAPII Transcription. Trends in Plant Science, 25(8), 744-764. https://doi.org/10.1016/j.tplants.2020.03.005

Vancouver

Leng X, Thomas Q, Rasmussen SH, Marquardt S. A G(enomic)P(ositioning)S(ystem) for Plant RNAPII Transcription. Trends in Plant Science. 2020;25(8):744-764. https://doi.org/10.1016/j.tplants.2020.03.005

Author

Leng, Xueyuan ; Thomas, Quentin ; Rasmussen, Simon Horskjær ; Marquardt, Sebastian. / A G(enomic)P(ositioning)S(ystem) for Plant RNAPII Transcription. I: Trends in Plant Science. 2020 ; Bind 25, Nr. 8. s. 744-764.

Bibtex

@article{82d1817dad6547ccb491a466e53a1dd8,
title = "A G(enomic)P(ositioning)S(ystem) for Plant RNAPII Transcription",
abstract = "Post-translational modifications (PTMs) of histone residues shape the landscape of gene expression by modulating the dynamic process of RNA polymerase II (RNAPII) transcription. The contribution of particular histone modifications to the definition of distinct RNAPII transcription stages remains poorly characterized in plants. Chromatin immunoprecipitation combined with next-generation sequencing (ChIP-seq) resolves the genomic distribution of histone modifications. Here, we review histone PTM ChIP-seq data in Arabidopsis thaliana and find support for a Genomic Positioning System (GPS) that guides RNAPII transcription. We review the roles of histone PTM {\textquoteleft}readers{\textquoteright}, {\textquoteleft}writers{\textquoteright}, and {\textquoteleft}erasers{\textquoteright}, with a focus on the regulation of gene expression and biological functions in plants. The distinct functions of RNAPII transcription during the plant transcription cycle may rely, in part, on the characteristic histone PTM profiles that distinguish transcription stages.",
author = "Xueyuan Leng and Quentin Thomas and Rasmussen, {Simon Horskj{\ae}r} and Sebastian Marquardt",
year = "2020",
doi = "10.1016/j.tplants.2020.03.005",
language = "English",
volume = "25",
pages = "744--764",
journal = "Trends in Plant Science",
issn = "1360-1385",
publisher = "Elsevier Ltd. * Trends Journals",
number = "8",

}

RIS

TY - JOUR

T1 - A G(enomic)P(ositioning)S(ystem) for Plant RNAPII Transcription

AU - Leng, Xueyuan

AU - Thomas, Quentin

AU - Rasmussen, Simon Horskjær

AU - Marquardt, Sebastian

PY - 2020

Y1 - 2020

N2 - Post-translational modifications (PTMs) of histone residues shape the landscape of gene expression by modulating the dynamic process of RNA polymerase II (RNAPII) transcription. The contribution of particular histone modifications to the definition of distinct RNAPII transcription stages remains poorly characterized in plants. Chromatin immunoprecipitation combined with next-generation sequencing (ChIP-seq) resolves the genomic distribution of histone modifications. Here, we review histone PTM ChIP-seq data in Arabidopsis thaliana and find support for a Genomic Positioning System (GPS) that guides RNAPII transcription. We review the roles of histone PTM ‘readers’, ‘writers’, and ‘erasers’, with a focus on the regulation of gene expression and biological functions in plants. The distinct functions of RNAPII transcription during the plant transcription cycle may rely, in part, on the characteristic histone PTM profiles that distinguish transcription stages.

AB - Post-translational modifications (PTMs) of histone residues shape the landscape of gene expression by modulating the dynamic process of RNA polymerase II (RNAPII) transcription. The contribution of particular histone modifications to the definition of distinct RNAPII transcription stages remains poorly characterized in plants. Chromatin immunoprecipitation combined with next-generation sequencing (ChIP-seq) resolves the genomic distribution of histone modifications. Here, we review histone PTM ChIP-seq data in Arabidopsis thaliana and find support for a Genomic Positioning System (GPS) that guides RNAPII transcription. We review the roles of histone PTM ‘readers’, ‘writers’, and ‘erasers’, with a focus on the regulation of gene expression and biological functions in plants. The distinct functions of RNAPII transcription during the plant transcription cycle may rely, in part, on the characteristic histone PTM profiles that distinguish transcription stages.

U2 - 10.1016/j.tplants.2020.03.005

DO - 10.1016/j.tplants.2020.03.005

M3 - Review

C2 - 32673579

VL - 25

SP - 744

EP - 764

JO - Trends in Plant Science

JF - Trends in Plant Science

SN - 1360-1385

IS - 8

ER -

ID: 244086399