Mani Arumugam
- 2024
- Published
Impact of acute alcohol consumption on circulating microbiome in asymptomatic alcohol-related liver disease
Israelsen, M., Alvarez Silva, Maria Camila, Madsen, B. S., Hansen, C. D., Torp, N. C., Johansen, S., Hansen, J. K., Prier Lindvig, K., Insonere, J., Riviere, V., Juel, H. B., Brejnrod, A., Jensen, Lars Juhl, Thiele, M., Lelouvier, B., Hansen, Torben, Arumugam, Mani & Krag, A., 2024, In: Gut. 73, 6, p. 1041-1044 gutjnl-2023-330360.Research output: Contribution to journal › Letter › Research › peer-review
- E-pub ahead of print
Opportunities and barriers in omics-based biomarker discovery for steatotic liver diseases
Thiele, M., Villesen, I. F., Niu, L., Johansen, S., Sulek, K., Nishijima, S., Espen, L. V., Keller, M., Israelsen, M., Suvitaival, T., Zawadzki, A. D., Juel, H. B., Brol, M. J., Stinson, S. E., Huang, Y., Silva, M. C. A., Kuhn, M., Anastasiadou, E., Leeming, D. J., Karsdal, M. & 12 others, , 2024, (E-pub ahead of print) In: Journal of Hepatology.Research output: Contribution to journal › Review › Research › peer-review
- 2023
- Published
Genetic analysis of blood molecular phenotypes reveals common properties in the regulatory networks affecting complex traits
Brown, A. A., Fernandez-Tajes, J. J., Hong, M. G., Brorsson, C. A., Koivula, R. W., Davtian, D., Dupuis, T., Sartori, A., Michalettou, T. D., Forgie, I. M., Adam, J., Allin, K. H., Caiazzo, R., Cederberg, H., De Masi, F., Elders, P. J. M., Giordano, G. N., Haid, M., Hansen, T., Hansen, T. H. & 134 others, , 2023, In: Nature Communications. 14, 17 p., 5062.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Quantitative differences in synthetic gut microbial inoculums do not affect the final stabilized in vitro community compositions
Gnanasekaran, Thiyagarajan, Sarathi, Arjun, Fang, Q., Azarm, A., Geraldo, Juliana Assis, Nigro, E. & Arumugam, Mani, 2023, In: mSystems. 8, 4, 16 p., e0124922.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rifaximin-α for liver fibrosis in patients with alcohol-related liver disease (GALA-RIF): a randomised, double-blind, placebo-controlled, phase 2 trial
Israelsen, M., Madsen, B. S., Torp, N., Johansen, S., Hansen, C. D., Detlefsen, S., Andersen, P., Hansen, J. K., Lindvig, K. P., Rasmussen, D. N., Thorhauge, K. H., Kjærgaard, M., Karsdal, M., Hansen, Torben, Arumugam, Mani, Trebicka, J., Thiele, M., Krag, A. & GALAXY, G., 2023, In: The Lancet Gastroenterology and Hepatology. 8, 6, p. 523-532 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Oral supplementation of nicotinamide riboside alters intestinal microbial composition in rats and mice, but not humans
Peluso, A. A., Lundgaard, A. T., Babaei, P., Mousovich-Neto, F., Rocha, A. L., Damgaard, M. V., Bak, E. G., Gnanasekaran, T., Dollerup, O. L., Trammell, S. A. J., Nielsen, T. S., Kern, T., Abild, C. B., Sulek, K., Ma, T., Gerhart-Hines, Z., Gillum, M. P., Arumugam, M., Ørskov, C., McCloskey, D. & 4 others, , 2023, In: npj Aging. 9, 21 p., 7.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Clostridium scindens secretome suppresses virulence gene expression of Clostridioides difficile in a bile acid-independent manner
Saenz, C., Fang, Q., Gnanasekaran, Thiyagarajan, Trammell, Sam, Buijink, Jesse A., Pisano, P., Wierer, M., Moens, F., Lengger, B., Brejnrod, A. & Arumugam, Mani, 2023, In: Microbiology Spectrum. 11, 5, p. 1-18 e0393322.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sphingolipids Are Depleted in Alcohol-Related Liver Fibrosis
Thiele, M., Suvitaival, T., Trošt, K., Kim, M., de Zawadzki, A., Kjaergaard, M., Rasmussen, D. N., Lindvig, K. P., Israelsen, M., Detlefsen, S., Andersen, P., Juel, H. B., Nielsen, T., Georgiou, S., Filippa, V., Kuhn, M., Nishijima, S., Moitinho-Silva, L., Rossing, P., Trebicka, J. & 14 others, , 2023, In: Gastroenterology. 164, 7, p. 1248-1260Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
The effect of gluten in adolescents and young adults with gastrointestinal symptoms: A blinded randomised cross-over trial
Crawley, C., Savino, N., Halby, C., Sander, S. D., Nybo Andersen, Anne-Marie, Arumugam, Mani, Murray, J., Christensen, R. & Husby, S., 2022, In: Alimentary Pharmacology and Therapeutics, Supplement. 55, 9, p. 1116-1127 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metagenomic evidence for co-occurrence of antibiotic, biocide and metal resistance genes in pigs
Li, Xuan Ji, Rensing, C., Vestergaard, G., Arumugam, Mani, Nesme, Joseph, Gupta, S., Brejnrod, A. D. & Sørensen, Søren Johannes, 2022, In: Environment International. 158, 10 p., 106899.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
MIntO: A Modular and Scalable Pipeline For Microbiome Metagenomic and Metatranscriptomic Data Integration
Saenz, C., Nigro, E., Gunalan, V. & Arumugam, Mani, 2022, In: Frontiers in Bioinformatics. 2, 15 p., 846922.Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
Trans-ethnic gut microbiota signatures of type 2 diabetes in Denmark and India
Alvarez-Silva, C., Kashani, A., Hansen, T. H., Pinna, N. K., Anjana, R. M., Dutta, A., Saxena, S., Støy, J., Kampmann, U., Nielsen, T., Jørgensen, T., Gnanaprakash, V., Gnanavadivel, R., Sukumaran, A., Rani, C. S. S., Færch, K., Radha, V., Balasubramanyam, M., Nair, G. B., Das, B. & 6 others, , 2021, In: Genome Medicine. 13, 37.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ecological adaptation and succession of human fecal microbial communities in an automated in vitro fermentation system
Gnanasekaran, Thiyagarajan, Geraldo, Juliana Assis, Ahrenkiel, D. W., Alvarez Silva, Maria Camila, Saenz, C., Khan, Adnan, Hanteer, O., Gunalan, V., Trost, K., Moritz, Thomas & Arumugam, Mani, 2021, In: mSystems. 6, 4, 18 p., e00232-21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic diversity and ecology of human-associated Akkermansia species in the gut microbiome revealed by extensive metagenomic assembly
Karcher, N., Nigro, E., Puncochar, M., Blanco-Miguez, A., Ciciani, M., Manghi, P., Zolfo, M., Cumbo, F., Manara, S., Golzato, D., Cereseto, A., Arumugam, Mani, Bui, T. P. N., Tytgat, H. L. P., Valles-Colomer, M., de Vos, W. M. & Segata, N., 2021, In: Genome Biology. 22, 24 p., 209.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Reporting guidelines for human microbiome research: the STORMS checklist
Mirzayi, C., Renson, A., Furlanello, C., Sansone, S. A., Zohra, F., Elsafoury, S., Geistlinger, L., Kasselman, L. J., Eckenrode, K., van de Wijgert, J., Loughman, A., Marques, F. Z., MacIntyre, D. A., Arumugam, M., Azhar, R., Beghini, F., Bergstrom, K., Bhatt, A., Bisanz, J. E., Braun, J. & 32 others, , 2021, In: Nature Medicine. 27, 11, p. 1885-1892 8 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Trans-ethnic gut microbial signatures of prediabetic subjects from India and Denmark
Pinna, N. K., Anjana, R. M., Saxena, S., Dutta, A., Gnanaprakash, V., Rameshkumar, G., Aswath, S., Raghavan, S., Rani, C. S. S., Radha, V., Balasubramanyam, M., Pant, A., Nielsen, T., Jørgensen, T., Færch, K., Kashani, A., Silva, M. C. A., Vestergaard, H., Hansen, T. H., Hansen, T. & 6 others, , 2021, In: Genome Medicine. 13, 20 p., 36.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Prognostic performance of 7 biomarkers compared to liver biopsy in early alcohol-related liver disease
Rasmussen, D. N., Thiele, M., Johansen, S., Kjærgaard, M., Lindvig, K. P., Israelsen, M., Antonsen, S., Detlefsen, S., Krag, A., Anastasiadou, E., Arumugam, M., Bork, P., Hansen, T., Hartoft, C., Israelsen, H., Karsdal, M., Legido-Quigley, C., Melberg, H. O., Trebicka, J., Mann, M. & 2 others, , 2021, In: Journal of Hepatology. 75, 5, p. 1017-1025 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Utilizing the gut microbiome in decompensated cirrhosis and acute-on-chronic liver failure
Trebicka, J., Bork, P., Krag, A. & Arumugam, Mani, 2021, In: Nature Reviews Gastroenterology & Hepatology. 18, p. 167-180 14 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
A Previously Undescribed Highly Prevalent Phage Identified in a Danish Enteric Virome Catalog
Van Espen, L., Bak, E. G., Beller, L., Close, L., Deboutte, W., Juel, H. B., Nielsen, T., Sinar, D., De Coninck, L., Frithioff-Bøjsøe, C., Fonvig, C. E., Jacobsen, S., Kjærgaard, M., Thiele, M., Fullam, A., Kuhn, M., Holm, J. C., Bork, P., Krag, A., Hansen, T. & 2 others, , 2021, In: mSystems. 6, 5, 20 p., e00382-21.Research output: Contribution to journal › Journal article › Research › peer-review
- 2020
- Published
Identification of Novel Bioactive Metabolites Produced During the Cocultivation of Probiotic Strains and Clostridium Difficile in In Vitro Setup
Gnanasekaran, Thiyagarajan, Saenz, C., Moritz, Thomas & Arumugam, Mani, 2020, In: Journal of Clinical Gastroenterology. 54, Suppl. 1, p. S12 1 p.Research output: Contribution to journal › Conference abstract in journal › Research
- Published
Perturbation of gut microbiota decreases susceptibility but does not modulate ongoing autoimmune neurological disease
Gödel, C., Kunkel, B., Kashani, A., Lassmann, H., Arumugam, Mani & Krishnamoorthy, G., 2020, In: Journal of Neuroinflammation. 17, 1, p. 79Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Butyrate producing colonic Clostridiales metabolise human milk oligosaccharides and cross feed on mucin via conserved pathways
Pichler, M. J., Yamada, C., Shuoker, B., Alvarez Silva, Maria Camila, Gotoh, A., Leth, M. L., Schoof, E., Katoh, T., Sakanaka, M., Katayama, T., Jin, C., Karlsson, N. G., Arumugam, Mani, Fushinobu, S. & Abou Hachem, M., 2020, In: Nature Communications. 11, 15 p., 3285.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Trust is good, control is better: technical considerations in blood microbiome analysis
Schierwagen, R., Alvarez Silva, Maria Camila, Servant, F., Trebicka, J., Lelouvier, B. & Arumugam, Mani, 2020, In: Gut. 69, 7, p. 1362-1363Research output: Contribution to journal › Letter › Research › peer-review
- Published
The intestinal microbiome is a co-determinant of the postprandial plasma glucose response
Søndertoft, N. B., Vogt, J. K., Arumugam, Mani, Kristensen, M., Gøbel, R. J., Fan, Yong, Lyu, Liwei, Bahl, M. I., Eriksen, C., Ängquist, Lars, Frøkiær, Hanne, Hansen, T. H., Brix, Susanne, Nielsen, H. B., Hansen, Torben, Vestergaard, H., Gupta, R., Licht, T. R., Lauritzen, Lotte & Pedersen, Oluf Borbye, 2020, In: P L o S One. 15, 9, 23 p., e0238648.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Variation in Bile Microbiome by the Etiology of Cholestatic Liver Disease
Tyc, O., Jansen, C., Schierwagen, R., Uschner, F. E., Israelsen, M., Klein, S., Ortiz, C., Strassburg, C. P., Zeuzem, S., Gu, W., Torres, S., Praktiknjo, M., Kersting, S., Langheinrich, M., Nattermann, J., Servant, F., Arumugam, M., Krag, A., Lelouvier, B., Weismueller, T. J. & 1 others, , 2020, In: Liver Transplantation. 26, 12, p. 1652-1657 6 p.Research output: Contribution to journal › Letter › Research
- 2019
- Published
Compartmentalization of Immune Response and Microbial Translocation in Decompensated Cirrhosis
Alvarez Silva, Maria Camila, Schierwagen, R., Pohlmann, A., Magdaleno, F., Uschner, F. E., Ryan, P., Vehreschild, M. J. G. T., Claria, J., Latz, E., Lelouvier, B., Arumugam, Mani & Trebicka, J., 2019, In: Frontiers in Immunology. 10, 11 p., 69.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 (Nature Biotechnology, (2019), 37, 8, (852-857), 10.1038/s41587-019-0209-9)
Bolyen, E., Rideout, J. R., Dillon, M. R., Bokulich, N. A., Abnet, C. C., Al-Ghalith, G. A., Alexander, H., Alm, E. J., Arumugam, M., Asnicar, F., Bai, Y., Bisanz, J. E., Bittinger, K., Brejnrod, A., Brislawn, C. J., Brown, C. T., Callahan, B. J., Caraballo-Rodríguez, A. M., Chase, J., Cope, E. K. & 92 others, , 1 Sep 2019, In: Nature Biotechnology. 37, 9, p. 1091 1 p.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Bolyen, E., Rideout, J. R., Dillon, M. R., Bokulich, N., Abnet, C. C., Al-Ghalith, G. A., Alexander, H., Alm, E. J., Arumugam, M., Asnicar, F., Bai, Y., Bisanz, J. E., Bittinger, K., Brejnrod, A., Brislawn, C. J., Brown, C. T., Callahan, B. J., Caraballo-Rodriguez, A. M., Chase, J., Cope, E. K. & 92 others, , 2019, In: Nature Biotechnology. 37, 8, p. 852-857Research output: Contribution to journal › Letter › Research › peer-review
- Published
Impaired glucose metabolism and altered gut microbiome despite calorie restriction of ob/ob mice
Kashani, A., Brejnrod, A. D., Jin, C., Kern, T., Madsen, A. N., Holm, L. A., Gerber, G. K., Holm, Jens-Christian, Hansen, Torben, Holst, Birgitte & Arumugam, Mani, 2019, In: Animal Microbiome. 1, 1, 16 p., 11.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genes controlling the activation of natural killer lymphocytes are epigenetically remodeled in intestinal cells from germ-free mice
Poupeau, A., Garde, C., Sulek, K., Citirikkaya, K., Treebak, Jonas Thue, Arumugam, Mani, Simar, D., Olofsson, L. E., Bäckhed, F. & Barrès, Romain, 2019, In: F A S E B Journal. 33, 2, p. 2719-2731 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Circulating microbiome in blood of different circulatory compartments
Schierwagen, R., Alvarez Silva, Maria Camila, Madsen, M. S. A., Kolbe, C. C., Meyer, C., Thomas, D., Uschner, F. E., Magdaleno, F., Jansen, C., Pohlmann, A., Praktiknjo, M., Hischebeth, G. T., Molitor, E., Latz, E., Lelouvier, B., Trebicka, J. & Arumugam, Mani, 2019, In: Gut. 68, 3, p. 578-580Research output: Contribution to journal › Letter › Research › peer-review
- Published
Author Correction: Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation (Nature Medicine, (2019), 25, 4, (667-678), 10.1038/s41591-019-0405-7)
Thomas, A. M., Manghi, P., Asnicar, F., Pasolli, E., Armanini, F., Zolfo, M., Beghini, F., Manara, S., Karcher, N., Pozzi, C., Gandini, S., Serrano, D., Tarallo, S., Francavilla, A., Gallo, G., Trompetto, M., Ferrero, G., Mizutani, S., Shiroma, H., Shiba, S. & 19 others, , 1 Dec 2019, In: Nature Medicine. 25, 12, p. 1948 1 p.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation
Thomas, A. M., Manghi, P., Asnicar, F., Pasolli, E., Armanini, F., Zolfo, M., Beghini, F., Manara, S., Karcher, N., Pozzi, C., Gandini, S., Serrano, D., Tarallo, S., Francavilla, A., Gallo, G., Trompetto, M., Ferrero, G., Mizutani, S., Shiroma, H., Shiba, S. & 19 others, , 2019, In: Nature Medicine. 25, 4, p. 667-678 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genetic studies of abdominal MRI data identify genes regulating hepcidin as major determinants of liver iron concentration
Wilman, H. R., Parisinos, C. A., Atabaki-Pasdar, N., Kelly, M., Thomas, E. L., Neubauer, S., Jennison, C., Ehrhardt, B., Baum, P., Schoelsch, C., Freijer, J., Grempler, R., Graefe-Mody, U., Hennige, A., Dings, C., Lehr, T., Scherer, N., Sihinecich, I., Pattou, F., Raverdi, V. & 31 others, , 2019, In: Journal of Hepatology. 71, 3, p. 594-602 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer
Wirbel, J., Pyl, P. T., Kartal, E., Zych, K., Kashani, A., Milanese, A., Fleck, J. S., Voigt, A. Y., Palleja, A., Ponnudurai, R., Sunagawa, S., Coelho, L. P., Schrotz-King, P., Vogtmann, E., Habermann, N., Niméus, E., Thomas, A. M., Manghi, P., Gandini, S., Serrano, D. & 15 others, , 2019, In: Nature Medicine. 25, 4, p. 679-689 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2018
- Published
The role of the mycobiota in the gut-liver axis
Alvarez Silva, Maria Camila, Brach, Thorsten, Brejnrod, A. D. & Arumugam, Mani, 9 Nov 2018, The Human Gut-Liver-Axis in Health and Disease. Springer, p. 133-145 13 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Education
- Published
Enterotypes in the landscape of gut microbial community composition
Costea, P. I., Hildebrand, F., Manimozhiyan, A., Bäckhed, F., Blaser, M. J., Bushman, F. D., De Vos, W. M., Ehrlich, S. D., Fraser, C. M., Hattori, M., Huttenhower, C., Jeffery, I. B., Knights, D., Lewis, J. D., Ley, R. E., Ochman, H., O'Toole, P. W., Quince, C., Relman, D. A., Shanahan, F. & 9 others, , 2018, In: Nature Microbiology. 3, 1, p. 8-16 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The role of the bacterial microbiota in alcoholic and non-alcoholic fatty liver disease
Madsen, Anne Lundager, Brach, Thorsten, Kern, T., Bak, Emilie Glad, Nielsen, T. & Arumugam, Mani, 9 Nov 2018, The Human Gut-Liver-Axis in Health and Disease. Springer, p. 89-104 16 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Education
- Published
Antifibrotic and molecular aspects of rifaximin in alcoholic liver disease: study protocol for a randomized controlled trial
Madsen, B. S., Trebicka, J., Thiele, M., Israelsen, M., Arumugam, Mani, Havelund, T. & Krag, A., 2018, In: Trials. 19, p. 1-5 5 p., 143.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Recovery of gut microbiota of healthy adults following antibiotic exposure
Palleja, A., Mikkelsen, K. H., Forslund, S. K., Kashani, A., Allin, K. H., Nielsen, T., Hansen, T. H., Liang, S., Feng, Q., Zhang, C., Pyl, P. T., Coelho, L. P., Yang, H., Wang, J., Typas, A., Nielsen, M. F., Nielsen, H. B., Bork, P., Wang, J., Vilsbøll, T. & 4 others, , Nov 2018, In: Nature Microbiology. 3, 11, p. 1255-1265 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2017
- Published
Corrigendum: Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota
Forslund, K., Hildebrand, F., Nielsen, T., Falony, G., Le Chatelier, E., Sunagawa, S., Prifti, E., Vieira-Silva, S., Gudmundsdottir, V., Pedersen, H. K., Arumugam, M., Kristiansen, K., Voigt, A. Y., Vestergaard, H., Hercog, R., Costea, P. I., Kultima, J. R., Li, J., Jørgensen, T., Levenez, F. & 10 others, , 3 May 2017, In: Nature. 545, 116, 1 p., 22318.Research output: Contribution to journal › Comment/debate › Research
- Published
Complete Genome Sequences of emm111 Type Streptococcus pyogenes Strain GUR, with Antitumor Activity, and Its Derivative Strain GURSA1 with an Inactivated emm Gene
Suvorova, M. A., Tsapieva, A. N., Bak, Emilie Glad, Chereshnev, V. A., Kiseleva, E. P., Suvorov, A. N. & Arumugam, Mani, 21 Sep 2017, In: Genome Announcements. 5, 38, 2 p., e00939-17.Research output: Contribution to journal › Journal article › Research
- Published
High-fat feeding rather than obesity drives taxonomical and functional changes in the gut microbiota in mice
Xiao, L., Sonne, S. B., Feng, Q., Chen, N., Xia, Z., Li, X., Fang, Z., Zhang, D., Fjære, E., Midtbø, L. K., Derrien, M., Hugenholtz, F., Tang, L., Li, J., Zhang, J., Liu, C., Hao, Q., Vogel, U. B., Mortensen, A., Kleerebezem, M. & 8 others, , 8 Apr 2017, In: Microbiome. 5, 12 p., 43.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metagenomic analysis of faecal microbiome as a tool towards targeted non-invasive biomarkers for colorectal cancer
Yu, J., Feng, Q., Wong, S. H., Zhang, D., Liang, Q. Y., Qin, Y., Tang, L., Zhao, H., Stenvang, J., Li, Y., Wang, X., Xu, X., Chen, N., Wu, W. K. K., Al-Aama, J., Nielsen, H. J., Kiilerich, P., Jensen, B. A. H., Yau, T. O., Lan, Z. & 19 others, , 2017, In: Gut. 66, p. 70-78 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2016
- Published
An Improved Method for High Quality Metagenomics DNA Extraction from Human and Environmental Samples
Bag, S., Saha, B., Mehta, O., Anbumani, D., Kumar, N., Dayal, M., Pant, A., Kumar, P., Saxena, S., Allin, K. H., Hansen, T., Arumugam, M., Vestergaard, H., Pedersen, O., Pereira, V., Abraham, P., Tripathi, R., Wadhwa, N., Bhatnagar, S., Prakash, V. G. & 7 others, , 2016, In: Scientific Reports. 6, 9 p., 26775.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Roux-en-Y gastric bypass surgery of morbidly obese patients induces swift and persistent changes of the individual gut microbiota
Palleja, A., Kashani, A., Allin, K. H., Nielsen, T., Zhang, C., Li, Y., Brach, Thorsten, Liang, S., Feng, Q., Jørgensen, N. B., Bojsen-Møller, K. N., Dirksen, C., Burgdorf, Kristoffer Sølvsten, Holst, Jens Juul, Madsbad, Sten, Wang, J., Pedersen, Oluf Borbye, Hansen, Torben & Arumugam, Mani, 2016, In: Genome Medicine. 8, 13 p., 67.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Human gut microbes impact host serum metabolome and insulin sensitivity
Pedersen, H. K., Gudmundsdottir, V., Nielsen, H. B., Hyotylainen, T., Nielsen, T., Jensen, B. A. H., Forslund, K., Hildebrand, F., Prifti, E., Falony, G., Le Chatelier, E., Levenez, F., Doré, J., Mattila, I., Plichta, D. R., Pöhö, P., Hellgren, L. I., Arumugam, M., Sunagawa, S., Vieira-Silva, S. & 14 others, , 2016, In: Nature. 535, 7612, p. 376-381 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2015
- Published
Interplay between FGF21 and insulin action in the liver regulates metabolism
Emanuelli, Brice, Vienberg, S. G., Smyth, G., Cheng, C., Stanford, K. I., Arumugam, Mani, Michael, M. D., Adams, A. C., Kharitonenkov, A. & Kahn, C. R., Jan 2015, In: The Journal of Clinical Investigation. 125, 1, p. 458Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Gut microbiome development along the colorectal adenoma-carcinoma sequence
Feng, Q., Liang, S., Jia, H., Stadlmayr, A., Tang, L., Lan, Z., Zhang, D., Xia, H., Xu, X., Jie, Z., Su, L., Li, X., Li, X., Li, J., Xiao, L., Huber-Schönauer, U., Niederseer, D., Xu, X., Al-Aama, J. Y., Yang, H. & 6 others, , 2015, In: Nature Communications. 6, 13 p., 6528.Research output: Contribution to journal › Journal article › Research › peer-review
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Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota
Forslund, K., Hildebrand, F., Nielsen, T., Falony, G., Le Chatelier, E., Sunagawa, S., Prifti, E., Vieira-Silva, S., Gudmundsdottir, V., Pedersen, H. K., Arumugam, M., Kristiansen, K., Yvonne Voigt, A., Vestergaard, H., Hercog, R., Igor Costea, P., Roat Kultima, J., Li, J., Jørgensen, T., Levenez, F. & 9 others, , 2015, In: Nature. 528, 7581, p. 262-266 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 41056735
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A human gut microbial gene catalogue established by metagenomic sequencing
Research output: Contribution to journal › Journal article › Research › peer-review
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639
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Circulating microbiome in blood of different circulatory compartments
Research output: Contribution to journal › Letter › Research › peer-review
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447
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An Improved Method for High Quality Metagenomics DNA Extraction from Human and Environmental Samples
Research output: Contribution to journal › Journal article › Research › peer-review
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