Insights into an unusual Auxiliary Activity 9 family member lacking the histidine brace motif of lytic polysaccharide monooxygenases
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Insights into an unusual Auxiliary Activity 9 family member lacking the histidine brace motif of lytic polysaccharide monooxygenases. / Frandsen, Kristian E H; Tovborg, Morten; Jørgensen, Christian I.; Spodsberg, Nikolai; Rosso, Marie-Noëlle; Hemsworth, Glyn R; Garman, Elspeth F; Grime, Geoffrey W; Poulsen, Jens-Christian N; Batth, Tanveer S.; Miyauchi, Shingo; Lipzen, Anna; Daum, Chris; Grigoriev, Igor V; Johansen, Katja S; Henrissat, Bernard; Berrin, Jean-Guy; Lo Leggio, Leila.
In: The Journal of Biological Chemistry, Vol. 294, 2019, p. 17117-17130.Research output: Contribution to journal › Journal article › Research › peer-review
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T1 - Insights into an unusual Auxiliary Activity 9 family member lacking the histidine brace motif of lytic polysaccharide monooxygenases
AU - Frandsen, Kristian E H
AU - Tovborg, Morten
AU - Jørgensen, Christian I.
AU - Spodsberg, Nikolai
AU - Rosso, Marie-Noëlle
AU - Hemsworth, Glyn R
AU - Garman, Elspeth F
AU - Grime, Geoffrey W
AU - Poulsen, Jens-Christian N
AU - Batth, Tanveer S.
AU - Miyauchi, Shingo
AU - Lipzen, Anna
AU - Daum, Chris
AU - Grigoriev, Igor V
AU - Johansen, Katja S
AU - Henrissat, Bernard
AU - Berrin, Jean-Guy
AU - Lo Leggio, Leila
N1 - Published under license by The American Society for Biochemistry and Molecular Biology, Inc.
PY - 2019
Y1 - 2019
N2 - Lytic polysaccharide monooxygenases (LPMOs) are redox-enzymes involved in biomass degradation. All characterized LPMOs possess an active site of two highly conserved histidine residues coordinating a copper ion (the histidine brace), which are essential for LPMO activity. However, some protein sequences that belong to the AA9 LPMO family, display a natural N-terminal His to Arg substitution (Arg-AA9). These are found almost entirely in the phylogenetic fungal class Agaricomycetes, associated with wood-decay, but no function has been demonstrated for any Arg-AA9. Through bioinformatics, transcriptomic and proteomic analyses we present data, which suggest that Arg-AA9 proteins could have a hitherto unidentified role in fungal degradation of lignocellulosic biomass in conjunction with other secreted fungal enzymes. We present the first structure of an Arg-AA9, LsAA9B, a naturally occurring protein from Lentinus similis The LsAA9B structure reveals gross changes in the region equivalent to the canonical LPMO copper binding site, whilst features implicated in carbohydrate binding in AA9 LPMOs have been maintained. We obtained a structure of LsAA9B with xylotetraose bound on the surface of the protein although with considerably different binding mode compared to other AA9 complex structures. In addition, we have found indications of protein phosphorylation near the N-terminal Arg and the carbohydrate binding site, for which the potential function is currently unknown. Our results are strong evidence that Arg-AA9s function markedly different from canonical AA9 LPMO, but nonetheless may play a role in fungal conversion of lignocellulosic biomass.
AB - Lytic polysaccharide monooxygenases (LPMOs) are redox-enzymes involved in biomass degradation. All characterized LPMOs possess an active site of two highly conserved histidine residues coordinating a copper ion (the histidine brace), which are essential for LPMO activity. However, some protein sequences that belong to the AA9 LPMO family, display a natural N-terminal His to Arg substitution (Arg-AA9). These are found almost entirely in the phylogenetic fungal class Agaricomycetes, associated with wood-decay, but no function has been demonstrated for any Arg-AA9. Through bioinformatics, transcriptomic and proteomic analyses we present data, which suggest that Arg-AA9 proteins could have a hitherto unidentified role in fungal degradation of lignocellulosic biomass in conjunction with other secreted fungal enzymes. We present the first structure of an Arg-AA9, LsAA9B, a naturally occurring protein from Lentinus similis The LsAA9B structure reveals gross changes in the region equivalent to the canonical LPMO copper binding site, whilst features implicated in carbohydrate binding in AA9 LPMOs have been maintained. We obtained a structure of LsAA9B with xylotetraose bound on the surface of the protein although with considerably different binding mode compared to other AA9 complex structures. In addition, we have found indications of protein phosphorylation near the N-terminal Arg and the carbohydrate binding site, for which the potential function is currently unknown. Our results are strong evidence that Arg-AA9s function markedly different from canonical AA9 LPMO, but nonetheless may play a role in fungal conversion of lignocellulosic biomass.
U2 - 10.1074/jbc.RA119.009223
DO - 10.1074/jbc.RA119.009223
M3 - Journal article
C2 - 31471321
VL - 294
SP - 17117
EP - 17130
JO - Journal of Biological Chemistry
JF - Journal of Biological Chemistry
SN - 0021-9258
ER -
ID: 227140097