The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants
Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
Standard
The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants. / Li, Linzhou; Wang, Sibo; Wang, Hongli; Sahu, Sunil Kumar; Marin, Birger; Li, Haoyuan; Xu, Yan; Liang, Hongping; Li, Zhen; Cheng, Shifeng; Reder, Tanja; Çebi, Zehra; Wittek, Sebastian; Petersen, Morten; Melkonian, Barbara; Du, Hongli; Yang, Huanming; Wang, Jian; Wong, Gane Ka-Shu; Xu, Xun; Liu, Xin; Van de Peer, Yves; Melkonian, Michael; Liu, Huan.
I: Nature Ecology and Evolution, Bind 4, Nr. 9, 2020, s. 1220-1231.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
Harvard
APA
Vancouver
Author
Bibtex
}
RIS
TY - JOUR
T1 - The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants
AU - Li, Linzhou
AU - Wang, Sibo
AU - Wang, Hongli
AU - Sahu, Sunil Kumar
AU - Marin, Birger
AU - Li, Haoyuan
AU - Xu, Yan
AU - Liang, Hongping
AU - Li, Zhen
AU - Cheng, Shifeng
AU - Reder, Tanja
AU - Çebi, Zehra
AU - Wittek, Sebastian
AU - Petersen, Morten
AU - Melkonian, Barbara
AU - Du, Hongli
AU - Yang, Huanming
AU - Wang, Jian
AU - Wong, Gane Ka-Shu
AU - Xu, Xun
AU - Liu, Xin
AU - Van de Peer, Yves
AU - Melkonian, Michael
AU - Liu, Huan
N1 - Author Correction: The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants DOI: 10.1038/s41559-020-1268-5
PY - 2020
Y1 - 2020
N2 - Genome analysis of the pico-eukaryotic marine green alga Prasinoderma coloniale CCMP 1413 unveils the existence of a novel phylum within green plants (Viridiplantae), the Prasinodermophyta, which diverged before the split of Chlorophyta and Streptophyta. Structural features of the genome and gene family comparisons revealed an intermediate position of the P. coloniale genome (25.3 Mb) between the extremely compact, small genomes of picoplanktonic Mamiellophyceae (Chlorophyta) and the larger, more complex genomes of early-diverging streptophyte algae. Reconstruction of the minimal core genome of Viridiplantae allowed identification of an ancestral toolkit of transcription factors and flagellar proteins. Adaptations of P. coloniale to its deep-water, oligotrophic environment involved expansion of light-harvesting proteins, reduction of early light-induced proteins, evolution of a distinct type of C4 photosynthesis and carbon-concentrating mechanism, synthesis of the metal-complexing metabolite picolinic acid, and vitamin B1, B7 and B12 auxotrophy. The P. coloniale genome provides first insights into the dawn of green plant evolution.
AB - Genome analysis of the pico-eukaryotic marine green alga Prasinoderma coloniale CCMP 1413 unveils the existence of a novel phylum within green plants (Viridiplantae), the Prasinodermophyta, which diverged before the split of Chlorophyta and Streptophyta. Structural features of the genome and gene family comparisons revealed an intermediate position of the P. coloniale genome (25.3 Mb) between the extremely compact, small genomes of picoplanktonic Mamiellophyceae (Chlorophyta) and the larger, more complex genomes of early-diverging streptophyte algae. Reconstruction of the minimal core genome of Viridiplantae allowed identification of an ancestral toolkit of transcription factors and flagellar proteins. Adaptations of P. coloniale to its deep-water, oligotrophic environment involved expansion of light-harvesting proteins, reduction of early light-induced proteins, evolution of a distinct type of C4 photosynthesis and carbon-concentrating mechanism, synthesis of the metal-complexing metabolite picolinic acid, and vitamin B1, B7 and B12 auxotrophy. The P. coloniale genome provides first insights into the dawn of green plant evolution.
UR - https://doi.org/10.1038/s41559-020-1268-5
U2 - 10.1038/s41559-020-1221-7
DO - 10.1038/s41559-020-1221-7
M3 - Journal article
C2 - 32572216
AN - SCOPUS:85086702397
VL - 4
SP - 1220
EP - 1231
JO - Nature Ecology & Evolution
JF - Nature Ecology & Evolution
SN - 2397-334X
IS - 9
ER -
ID: 244278791