PET-BIDS, an extension to the brain imaging data structure for positron emission tomography

Publikation: Working paper › Preprint › Forskning

Standard

PET-BIDS, an extension to the brain imaging data structure for positron emission tomography. / Nørgaard, Martin; Matheson, Granville J; Hansen, Hanne D; Thomas, Adam; Searle, Graham; Rizzo, Gaia; Veronese, Mattia; Giacomel, Alessio; Yaqub, Maqsood; Tonietto, Matteo; Funck, Thomas; Gillman, Ashley; Boniface, Hugo; Routier, Alexandre; Dalenberg, Jelle R; Betthauser, Tobey; Feingold, Franklin; Markiewicz, Christopher J; Gorgolewski, Krzysztof J; Blair, Ross W; Appelhoff, Stefan; Gau, Remi; Salo, Taylor; Niso, Guiomar; Pernet, Cyril; Phillips, Christophe; Oostenveld, Robert; Gallezot, Jean-Dominique; Carson, Richard E; Knudsen, Gitte M; Innis, Robert B; Ganz, Melanie.

2021.

Publikation: Working paper › Preprint › Forskning

Harvard

Nørgaard, M, Matheson, GJ, Hansen, HD, Thomas, A, Searle, G, Rizzo, G, Veronese, M, Giacomel, A, Yaqub, M, Tonietto, M, Funck, T, Gillman, A, Boniface, H, Routier, A, Dalenberg, JR, Betthauser, T, Feingold, F, Markiewicz, CJ, Gorgolewski, KJ, Blair, RW, Appelhoff, S, Gau, R, Salo, T, Niso, G, Pernet, C, Phillips, C, Oostenveld, R, Gallezot, J-D, Carson, RE, Knudsen, GM, Innis, RB & Ganz, M 2021 'PET-BIDS, an extension to the brain imaging data structure for positron emission tomography'. https://doi.org/10.1101/2021.06.16.448390

APA

Nørgaard, M., Matheson, G. J., Hansen, H. D., Thomas, A., Searle, G., Rizzo, G., Veronese, M., Giacomel, A., Yaqub, M., Tonietto, M., Funck, T., Gillman, A., Boniface, H., Routier, A., Dalenberg, J. R., Betthauser, T., Feingold, F., Markiewicz, C. J., Gorgolewski, K. J., ... Ganz, M. (2021). PET-BIDS, an extension to the brain imaging data structure for positron emission tomography. bioRxiv https://doi.org/10.1101/2021.06.16.448390

Vancouver

Nørgaard M, Matheson GJ, Hansen HD, Thomas A, Searle G, Rizzo G o.a. PET-BIDS, an extension to the brain imaging data structure for positron emission tomography. 2021. https://doi.org/10.1101/2021.06.16.448390

Author

Nørgaard, Martin ; Matheson, Granville J ; Hansen, Hanne D ; Thomas, Adam ; Searle, Graham ; Rizzo, Gaia ; Veronese, Mattia ; Giacomel, Alessio ; Yaqub, Maqsood ; Tonietto, Matteo ; Funck, Thomas ; Gillman, Ashley ; Boniface, Hugo ; Routier, Alexandre ; Dalenberg, Jelle R ; Betthauser, Tobey ; Feingold, Franklin ; Markiewicz, Christopher J ; Gorgolewski, Krzysztof J ; Blair, Ross W ; Appelhoff, Stefan ; Gau, Remi ; Salo, Taylor ; Niso, Guiomar ; Pernet, Cyril ; Phillips, Christophe ; Oostenveld, Robert ; Gallezot, Jean-Dominique ; Carson, Richard E ; Knudsen, Gitte M ; Innis, Robert B ; Ganz, Melanie. / PET-BIDS, an extension to the brain imaging data structure for positron emission tomography. 2021. (bioRxiv).

Bibtex

@techreport{73b3ec1e380d4cae8aa5bc8cf3b9688f,
title = "PET-BIDS, an extension to the brain imaging data structure for positron emission tomography",
abstract = "The Brain Imaging Data Structure (BIDS) is a standard for organizing and describing neuroimaging datasets. It serves not only to facilitate the process of data sharing and aggregation, but also to simplify the application and development of new methods and software for working with neuroimaging data. Here, we present an extension of BIDS to include positron emission tomography (PET) data (PET-BIDS). We describe the PET-BIDS standard in detail and share several open-access datasets curated following PET-BIDS. Additionally, we highlight several tools which are already available for converting, validating and analyzing PET-BIDS datasets.Competing Interest StatementThe authors have declared no competing interest.",
author = "Martin N{\o}rgaard and Matheson, {Granville J} and Hansen, {Hanne D} and Adam Thomas and Graham Searle and Gaia Rizzo and Mattia Veronese and Alessio Giacomel and Maqsood Yaqub and Matteo Tonietto and Thomas Funck and Ashley Gillman and Hugo Boniface and Alexandre Routier and Dalenberg, {Jelle R} and Tobey Betthauser and Franklin Feingold and Markiewicz, {Christopher J} and Gorgolewski, {Krzysztof J} and Blair, {Ross W} and Stefan Appelhoff and Remi Gau and Taylor Salo and Guiomar Niso and Cyril Pernet and Christophe Phillips and Robert Oostenveld and Jean-Dominique Gallezot and Carson, {Richard E} and Knudsen, {Gitte M} and Innis, {Robert B} and Melanie Ganz",
year = "2021",
doi = "10.1101/2021.06.16.448390",
language = "English",
series = "bioRxiv",
type = "WorkingPaper",

}

RIS

TY - UNPB

T1 - PET-BIDS, an extension to the brain imaging data structure for positron emission tomography

AU - Nørgaard, Martin

AU - Matheson, Granville J

AU - Hansen, Hanne D

AU - Thomas, Adam

AU - Searle, Graham

AU - Rizzo, Gaia

AU - Veronese, Mattia

AU - Giacomel, Alessio

AU - Yaqub, Maqsood

AU - Tonietto, Matteo

AU - Funck, Thomas

AU - Gillman, Ashley

AU - Boniface, Hugo

AU - Routier, Alexandre

AU - Dalenberg, Jelle R

AU - Betthauser, Tobey

AU - Feingold, Franklin

AU - Markiewicz, Christopher J

AU - Gorgolewski, Krzysztof J

AU - Blair, Ross W

AU - Appelhoff, Stefan

AU - Gau, Remi

AU - Salo, Taylor

AU - Niso, Guiomar

AU - Pernet, Cyril

AU - Phillips, Christophe

AU - Oostenveld, Robert

AU - Gallezot, Jean-Dominique

AU - Carson, Richard E

AU - Knudsen, Gitte M

AU - Innis, Robert B

AU - Ganz, Melanie

PY - 2021

Y1 - 2021

N2 - The Brain Imaging Data Structure (BIDS) is a standard for organizing and describing neuroimaging datasets. It serves not only to facilitate the process of data sharing and aggregation, but also to simplify the application and development of new methods and software for working with neuroimaging data. Here, we present an extension of BIDS to include positron emission tomography (PET) data (PET-BIDS). We describe the PET-BIDS standard in detail and share several open-access datasets curated following PET-BIDS. Additionally, we highlight several tools which are already available for converting, validating and analyzing PET-BIDS datasets.Competing Interest StatementThe authors have declared no competing interest.

AB - The Brain Imaging Data Structure (BIDS) is a standard for organizing and describing neuroimaging datasets. It serves not only to facilitate the process of data sharing and aggregation, but also to simplify the application and development of new methods and software for working with neuroimaging data. Here, we present an extension of BIDS to include positron emission tomography (PET) data (PET-BIDS). We describe the PET-BIDS standard in detail and share several open-access datasets curated following PET-BIDS. Additionally, we highlight several tools which are already available for converting, validating and analyzing PET-BIDS datasets.Competing Interest StatementThe authors have declared no competing interest.

UR - http://biorxiv.org/content/early/2021/06/17/2021.06.16.448390.abstract

UR - https://www.mendeley.com/catalogue/ddf31d2e-6c74-3c6e-9fb9-b83a0a934810/

U2 - 10.1101/2021.06.16.448390

DO - 10.1101/2021.06.16.448390

M3 - Preprint

T3 - bioRxiv

BT - PET-BIDS, an extension to the brain imaging data structure for positron emission tomography

ER -

ID: 299692497