Multiomic Analysis of the UV-Induced DNA Damage Response.
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Multiomic Analysis of the UV-Induced DNA Damage Response. / Boeing, S; Williamson, L; Encheva, V; Gori, I; Saunders, RE; Instrell, R; Aygün, O; Rodriguez-Martinez, M; Weems, JC; Kelly, GP; Conaway, JW; Conaway, RC; Svejstrup, JQ.
I: Cell Reports, Bind 15, Nr. 7, 2016, s. 1597-1610.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt
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TY - JOUR
T1 - Multiomic Analysis of the UV-Induced DNA Damage Response.
AU - Boeing, S
AU - Williamson, L
AU - Encheva, V
AU - Gori, I
AU - Saunders, RE
AU - Instrell, R
AU - Aygün, O
AU - Rodriguez-Martinez, M
AU - Weems, JC
AU - Kelly, GP
AU - Conaway, JW
AU - Conaway, RC
AU - Svejstrup, JQ
PY - 2016
Y1 - 2016
N2 - In order to facilitate the identification of factors and pathways in the cellular response to UV-induced DNA damage, several descriptive proteomic screens and a functional genomics screen were performed in parallel. Numerous factors could be identified with high confidence when the screen results were superimposed and interpreted together, incorporating biological knowledge. A searchable database, bioLOGIC, which provides access to relevant information about a protein or process of interest, was established to host the results and facilitate data mining. Besides uncovering roles in the DNA damage response for numerous proteins and complexes, including Integrator, Cohesin, PHF3, ASC-1, SCAF4, SCAF8, and SCAF11, we uncovered a role for the poorly studied, melanoma-associated serine/threonine kinase 19 (STK19). Besides effectively uncovering relevant factors, the multiomic approach also provides a systems-wide overview of the diverse cellular processes connected to the transcription-related DNA damage response.
AB - In order to facilitate the identification of factors and pathways in the cellular response to UV-induced DNA damage, several descriptive proteomic screens and a functional genomics screen were performed in parallel. Numerous factors could be identified with high confidence when the screen results were superimposed and interpreted together, incorporating biological knowledge. A searchable database, bioLOGIC, which provides access to relevant information about a protein or process of interest, was established to host the results and facilitate data mining. Besides uncovering roles in the DNA damage response for numerous proteins and complexes, including Integrator, Cohesin, PHF3, ASC-1, SCAF4, SCAF8, and SCAF11, we uncovered a role for the poorly studied, melanoma-associated serine/threonine kinase 19 (STK19). Besides effectively uncovering relevant factors, the multiomic approach also provides a systems-wide overview of the diverse cellular processes connected to the transcription-related DNA damage response.
U2 - 10.1016/j.celrep.2016.04.047
DO - 10.1016/j.celrep.2016.04.047
M3 - Tidsskriftartikel
C2 - 27184836
VL - 15
SP - 1597
EP - 1610
JO - Cell Reports
JF - Cell Reports
SN - 2211-1247
IS - 7
ER -
ID: 331083528