Robin Andersson
Associate Professor
Computational and RNA Biology
Ole Maaløes Vej 5
2200 København N.
- 2010
Frequent genetic differences between matched primary and metastatic breast cancer provide an approach to identification of biomarkers for disease progression
Popławski, A. B., Jankowski, M., Erickson, S. W., Díaz de Ståhl, T., Partridge, E. C., Crasto, C., Guo, J., Gibson, J., Menzel, U., Bruder, C. E., Kaczmarczyk, A., Benetkiewicz, M., Andersson, R., Sandgren, J., Zegarska, B., Bała, D., Srutek, E., Allison, D. B., Piotrowski, A., Zegarski, W. & 1 others, , May 2010, In: European Journal of Human Genetics. 18, 5, p. 560-8 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
SICTIN: Rapid footprinting of massively parallel sequencing data
Enroth, S., Andersson, Robin, Wadelius, C. & Komorowski, J., 2010, In: BioData Mining. 3, 1, p. 4Research output: Contribution to journal › Journal article › Research › peer-review
- 2009
Characterization of novel and complex genomic aberrations in glioblastoma using a 32K BAC array
Nord, H., Hartmann, C., Andersson, Robin, Menzel, U., Pfeifer, S., Piotrowski, A., Bogdan, A., Kloc, W., Sandgren, J., Olofsson, T., Hesselager, G., Blomquist, E., Komorowski, J., von Deimling, A., Bruder, C. E. G., Dumanski, J. P. & Díaz de Ståhl, T., Dec 2009, In: Neuro-Oncology. 11, 6, p. 803-18 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
Genome-wide high-resolution analysis of DNA copy number alterations in NF1-associated malignant peripheral nerve sheath tumors using 32K BAC array
Mantripragada, K. K., Díaz de Ståhl, T., Patridge, C., Menzel, U., Andersson, Robin, Chuzhanova, N., Kluwe, L., Guha, A., Mautner, V., Dumanski, J. P. & Upadhyaya, M., Oct 2009, In: Genes, Chromosomes & Cancer. 48, 10, p. 897-907 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
Nucleosomes are well positioned in exons and carry characteristic histone modifications
Andersson, Robin, Enroth, S., Rada-Iglesias, A., Wadelius, C. & Komorowski, J., Oct 2009, In: Genome Research. 19, 10, p. 1732-41 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
Using multi-data hidden Markov models trained on local neighborhoods of protein structure to predict residue-residue contacts
Björkholm, P., Daniluk, P., Kryshtafovych, A., Fidelis, K., Andersson, Robin & Hvidsten, T. R., 15 May 2009, In: Bioinformatics (Online). 25, 10, p. 1264-70 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
Histone H3 lysine 27 trimethylation in adult differentiated colon associated to cancer DNA hypermethylation
Rada-Iglesias, A., Enroth, S., Andersson, Robin, Wanders, A., Påhlman, L., Komorowski, J. & Wadelius, C., 16 Feb 2009, In: Epigenetics : official journal of the DNA Methylation Society. 4, 2, p. 107-13 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2008
Somatic mosaicism for copy number variation in differentiated human tissues
Piotrowski, A., Bruder, C. E. G., Andersson, Robin, Diaz de Ståhl, T., Menzel, U., Sandgren, J., Poplawski, A., von Tell, D., Crasto, C., Bogdan, A., Bartoszewski, R., Bebok, Z., Krzyzanowski, M., Jankowski, Z., Partridge, E. C., Komorowski, J. & Dumanski, J. P., Sep 2008, In: Human Mutation. 29, 9, p. 1118-24 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
A segmental maximum a posteriori approach to genome-wide copy number profiling
Andersson, Robin, Bruder, C. E. G., Piotrowski, A., Menzel, U., Nord, H., Sandgren, J., Hvidsten, T. R., Diaz de Ståhl, T., Dumanski, J. P. & Komorowski, J., 15 Mar 2008, In: Bioinformatics (Online). 24, 6, p. 751-8 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
Phenotypically concordant and discordant monozygotic twins display different DNA copy-number-variation profiles
Bruder, C. E. G., Piotrowski, A., Gijsbers, A. A. C. J., Andersson, R., Erickson, S., Diaz de Ståhl, T., Menzel, U., Sandgren, J., von Tell, D., Poplawski, A., Crowley, M., Crasto, C., Partridge, E. C., Tiwari, H., Allison, D. B., Komorowski, J., van Ommen, G-J. B., Boomsma, D. I., Pedersen, N. L., den Dunnen, J. T. & 2 others, , Mar 2008, In: American Journal of Human Genetics. 82, 3, p. 763-71 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 32384007
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Identification of TNF-α-responsive promoters and enhancers in the intestinal epithelial cell model Caco-2
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Cancer associated epigenetic transitions identified by genome-wide histone methylation binding profiles in human colorectal cancer samples and paired normal mucosa
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A strand specific high resolution normalization method for chip-sequencing data employing multiple experimental control measurements.
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