Mikkel Schubert

Mikkel Schubert

Research Consultant


  1. 2018
  2. Published

    High-Throughput DNA sequencing of ancient wood

    Wagner, S., Lagane, F., Seguin-Orlando, A., Schubert, M., Leroy, T., Guichoux, E., Chancerel, E., Bech-Hebelstrup, I., Bernard, V., Billard, C., Billaud, Y., Bolliger, M., Croutsch, C., Cufar, K., Eynaud, F., Heussner, K. U., Koeninger, J., Langenegger, F., Leroy, F., Lima, C. & 15 others, Martinelli, N., Momber, G., Billamboz, A., Nelle, O., Palomo, A., Pique, R., Ramstein, M., Schweichel, R., Staeuble, H., Tegel, W., Terradas, X., Verdin, F., Plomion, C., Kremer, A. & Orlando, L. A. A., 2018, In: Molecular Ecology. 27, 5, p. 1138-1154 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. 2017
  4. Published

    Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds

    Schaefer, R. J., Schubert, M., Bailey, E., Bannasch, D. L., Barrey, E., Bar-Gal, G. K., Brem, G., Brooks, S. A., Distl, O., Fries, R., Finno, C. J., Gerber, V., Haase, B., Jagannathan, V., Kalbfleisch, T., Leeb, T., Lindgren, G., Lopes, M. S., Mach, N., Machado, A. D. C. & 15 others, MacLeod, J. N., McCoy, A., Metzger, J., Penedo, C., Polani, S., Rieder, S., Tammen, I., Tetens, J., Thaller, G., Verini-Supplizi, A., Wade, C., Wallner, B., Orlando, L. A. A., Mickelson, J. R. & McCue, M. E., 27 Jul 2017, In: BMC Genomics. 18, 18 p., 565.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Ancient genomic changes associated with domestication of the horse

    Sanz, P. L., Gamba, C., Gaunitz, C., Der Sarkissian, C., Pruvost, M., Albrechtsen, A., Fages, A. A., Khan, N., Schubert, M., Jagannathan, V., Serres-Armero, A., Kuderna, L. F. K., Povolotskaya, I. S., Seguin-Orlando, A., Lepetz, S., Neuditschko, M., Thèves, C., Alquraishi, S., Alfarhan, A. H., AL-Rasheid, K. & 13 others, Rieder, S., Samashev, Z., Francfort, H., Benecke, N., Hofreiter, M., Ludwig, A., Keyser, C., Marques-Bonet, T., Ludes, B., Crubézy, E., Leeb, T., Willerslev, Eske & Orlando, L. A. A., 28 Apr 2017, In: Science. 356, 6336, p. 442-445 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Zonkey: a simple, accurate and sensitive pipeline to genetically identify equine Fl-hybrids in archaeological assemblages

    Schubert, Mikkel, Mashkour, M., Gaunitz, Charleen, Fages, A. A., Seguin-Orlando, A., Sheikhi, S., Alfarhan, A. H., Alquraishi, S. A., Al-Rasheid, K. A. S., Chuang, R., Ermini, L., Gamba, C., Weinstock, J., Vedat, O. & Orlando, L. A. A., Feb 2017, In: Journal of Archaeological Science. 78, p. 147-157 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Evolutionary patterns and processes: lessons from ancient DNA

    Leonardi, M., Sanz, P. L., Der Sarkissian, C., Schubert, Mikkel, Alfarhan, A. H., Alquraishi, S. A., Al-Rasheid, K. A. S., Gamba, C., Willerslev, Eske & Orlando, L. A. A., 2017, In: Systematic Biology. 66, 1, p. e1-e29 29 p., syw059.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. 2016
  9. Published

    The evolutionary origin and genetic makeup of domestic horses

    Sanz, P. L., Fages, A. A., Gaunitz, Charleen, Leonardi, M., Wagner, S., Khan, N., Hanghøj, Kristian Ebbesen, Alquraishi, S. A., Alfarhan, A. H., Al-Rasheid, K. A., Der Sarkissian, C., Schubert, Mikkel & Orlando, L. A. A., Oct 2016, In: Genetics. 204, 2, p. 423-434 12 p.

    Research output: Contribution to journalReviewResearchpeer-review

  10. Published

    A genomewide catalogue of single nucleotide polymorphisms in white-beaked and Atlantic white-sided dolphins

    Fernandez Garcia, R., Schubert, Mikkel, Vargas-Velazquez, A. M., Brownlow, A., Vikingsson, G. A., Siebert, U., Jensen, L. F., Øien, N., Wall, D., Rogan, E., Mikkelsen, B., Dabin, W., Alfarhan, A. H., Alquraishi, S. A., Al-Rasheid, K. A. S., Guillot, G. & Orlando, L. A. A., 2016, In: Molecular Ecology Resources. 16, 1, p. 266-276 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    AdapterRemoval v2: rapid adapter trimming, identification, and read merging

    Schubert, Mikkel, Lindgreen, S. & Orlando, L. A. A., 2016, In: BMC Research Notes. 9, 7 p., 88.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Fast, accurate and automatic ancient nucleosome and methylation maps with epiPALEOMIX

    Hanghøj, Kristian Ebbesen, Seguin-Orlando, A., Schubert, Mikkel, Madsen, T., Pedersen, J. S., Willerslev, Eske & Orlando, L. A. A., 2016, In: Molecular Biology and Evolution. 33, 12, p. 3284-3298 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Genomic characterization of a South American Phytophthora hybrid mandates reassessment of the geographic origins of Phytophthora infestans

    Martin, M. D., Vieira, Filipe Garrett, Ho, S. Y. W., Wales, N., Schubert, Mikkel, Seguin-Orlando, A., Ristaino, J. B. & Gilbert, M Thomas P, 2016, In: Molecular Biology and Evolution. 33, 2, p. 478-491 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

ID: 336978246