SmashCommunity: A metagenomic annotation and analysis tool.
Research output: Contribution to journal › Journal article › Research › peer-review
SUMMARY: SmashCommunity is a stand-alone metagenomic annotation and analysis pipeline suitable for data from Sanger and 454 sequencing technologies. It supports state-of-the-art software for essential metagenomic tasks such as assembly and gene prediction. It provides tools to estimate the quantitative phylogenetic and functional compositions of metagenomes, to compare compositions of multiple metagenomes and to produce intuitive visual representations of such analyses. AVAILABILITY: SmashCommunity is freely available at http://www.bork.embl.de/software/smash CONTACT: bork@embl.de.
Original language | English |
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Journal | Bioinformatics |
Volume | 26 |
Issue number | 23 |
Pages (from-to) | 2977-2978 |
Number of pages | 2 |
ISSN | 1367-4803 |
DOIs | |
Publication status | Published - Oct 2010 |
ID: 43976240