Multiomic Analysis of the UV-Induced DNA Damage Response.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  • S Boeing
  • L Williamson
  • V Encheva
  • I Gori
  • RE Saunders
  • R Instrell
  • O Aygün
  • M Rodriguez-Martinez
  • JC Weems
  • GP Kelly
  • JW Conaway
  • RC Conaway
  • Svejstrup, Jesper Qualmann
In order to facilitate the identification of factors and pathways in the cellular response to UV-induced DNA damage, several descriptive proteomic screens and a functional genomics screen were performed in parallel. Numerous factors could be identified with high confidence when the screen results were superimposed and interpreted together, incorporating biological knowledge. A searchable database, bioLOGIC, which provides access to relevant information about a protein or process of interest, was established to host the results and facilitate data mining. Besides uncovering roles in the DNA damage response for numerous proteins and complexes, including Integrator, Cohesin, PHF3, ASC-1, SCAF4, SCAF8, and SCAF11, we uncovered a role for the poorly studied, melanoma-associated serine/threonine kinase 19 (STK19). Besides effectively uncovering relevant factors, the multiomic approach also provides a systems-wide overview of the diverse cellular processes connected to the transcription-related DNA damage response.
OriginalsprogUdefineret/Ukendt
TidsskriftCell Reports
Vol/bind15
Udgave nummer7
Sider (fra-til)1597-1610
ISSN2211-1247
DOI
StatusUdgivet - 2016
Eksternt udgivetJa

ID: 331083528