Low-dose PET image noise reduction using deep learning: Application to cardiac viability FDG imaging in patients with ischemic heart disease

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Standard

Low-dose PET image noise reduction using deep learning : Application to cardiac viability FDG imaging in patients with ischemic heart disease. / Ladefoged, Claes Nøhr; Hasbak, Philip; Hornnes, Charlotte; Højgaard, Liselotte; Andersen, Flemming Littrup.

I: Physics in Medicine and Biology, Bind 66, Nr. 5, 054003, 2021.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

Harvard

Ladefoged, CN, Hasbak, P, Hornnes, C, Højgaard, L & Andersen, FL 2021, 'Low-dose PET image noise reduction using deep learning: Application to cardiac viability FDG imaging in patients with ischemic heart disease', Physics in Medicine and Biology, bind 66, nr. 5, 054003. https://doi.org/10.1088/1361-6560/abe225

APA

Ladefoged, C. N., Hasbak, P., Hornnes, C., Højgaard, L., & Andersen, F. L. (2021). Low-dose PET image noise reduction using deep learning: Application to cardiac viability FDG imaging in patients with ischemic heart disease. Physics in Medicine and Biology, 66(5), [054003]. https://doi.org/10.1088/1361-6560/abe225

Vancouver

Ladefoged CN, Hasbak P, Hornnes C, Højgaard L, Andersen FL. Low-dose PET image noise reduction using deep learning: Application to cardiac viability FDG imaging in patients with ischemic heart disease. Physics in Medicine and Biology. 2021;66(5). 054003. https://doi.org/10.1088/1361-6560/abe225

Author

Ladefoged, Claes Nøhr ; Hasbak, Philip ; Hornnes, Charlotte ; Højgaard, Liselotte ; Andersen, Flemming Littrup. / Low-dose PET image noise reduction using deep learning : Application to cardiac viability FDG imaging in patients with ischemic heart disease. I: Physics in Medicine and Biology. 2021 ; Bind 66, Nr. 5.

Bibtex

@article{3d3263b1b4454a439d10bb60d27cb33f,
title = "Low-dose PET image noise reduction using deep learning: Application to cardiac viability FDG imaging in patients with ischemic heart disease",
abstract = "Introduction. Cardiac [18F]FDG-PET is widely used for viability testing in patients with chronic ischemic heart disease. Guidelines recommend injection of 200-350 MBq [18F]FDG, however, a reduction of radiation exposure has become increasingly important, but might come at the cost of reduced diagnostic accuracy due to the increased noise in the images. We aimed to explore the use of a common deep learning (DL) network for noise reduction in low-dose PET images, and to validate its accuracy using the clinical quantitative metrics used to determine cardiac viability in patients with ischemic heart disease. Methods. We included 168 patients imaged with cardiac [18F]FDG-PET/CT. We simulated a reduced dose by keeping counts at thresholds 1% and 10%. 3D U-net with five blocks was trained to de-noise full PET volumes (128 × 128 × 111). The low-dose and de-noised images were compared in Corridor4DM to the full-dose PET images. We used the default segmentation of the left ventricle to extract the quantitative metrics end-diastolic volume (EDV), end-systolic volume (ESV), and left ventricular ejection fraction (LVEF) from the gated images, and FDG defect extent from the static images. Results. Our de-noising models were able to recover the PET signal for both the static and gated images in either dose-reduction. For the 1% low-dose images, the error is most pronounced for EDV and ESV, where the average underestimation is 25%. No bias was observed using the proposed DL de-noising method. De-noising minimized the outliers found for the 1% and 10% low-dose measurements of LVEF and extent. Accuracy of differential diagnosis based on LVEF threshold was highly improved after de-noising. Conclusion. A significant dose reduction can be achieved for cardiac [18F]FDG images used for viability testing in patients with ischemic heart disease without significant loss of diagnostic accuracy when using our DL model for noise reduction. Both 1% and 10% dose reductions are possible with clinically quantitative metrics comparable to that obtained with a full dose. ",
keywords = "Cardiac viability, Convolutional neural network, Deep learning, Low-dose, Pet/ct",
author = "Ladefoged, {Claes N{\o}hr} and Philip Hasbak and Charlotte Hornnes and Liselotte H{\o}jgaard and Andersen, {Flemming Littrup}",
note = "Publisher Copyright: {\textcopyright} 2021 Institute of Physics and Engineering in Medicine.",
year = "2021",
doi = "10.1088/1361-6560/abe225",
language = "English",
volume = "66",
journal = "Physics in Medicine and Biology",
issn = "0031-9155",
publisher = "Institute of Physics Publishing Ltd",
number = "5",

}

RIS

TY - JOUR

T1 - Low-dose PET image noise reduction using deep learning

T2 - Application to cardiac viability FDG imaging in patients with ischemic heart disease

AU - Ladefoged, Claes Nøhr

AU - Hasbak, Philip

AU - Hornnes, Charlotte

AU - Højgaard, Liselotte

AU - Andersen, Flemming Littrup

N1 - Publisher Copyright: © 2021 Institute of Physics and Engineering in Medicine.

PY - 2021

Y1 - 2021

N2 - Introduction. Cardiac [18F]FDG-PET is widely used for viability testing in patients with chronic ischemic heart disease. Guidelines recommend injection of 200-350 MBq [18F]FDG, however, a reduction of radiation exposure has become increasingly important, but might come at the cost of reduced diagnostic accuracy due to the increased noise in the images. We aimed to explore the use of a common deep learning (DL) network for noise reduction in low-dose PET images, and to validate its accuracy using the clinical quantitative metrics used to determine cardiac viability in patients with ischemic heart disease. Methods. We included 168 patients imaged with cardiac [18F]FDG-PET/CT. We simulated a reduced dose by keeping counts at thresholds 1% and 10%. 3D U-net with five blocks was trained to de-noise full PET volumes (128 × 128 × 111). The low-dose and de-noised images were compared in Corridor4DM to the full-dose PET images. We used the default segmentation of the left ventricle to extract the quantitative metrics end-diastolic volume (EDV), end-systolic volume (ESV), and left ventricular ejection fraction (LVEF) from the gated images, and FDG defect extent from the static images. Results. Our de-noising models were able to recover the PET signal for both the static and gated images in either dose-reduction. For the 1% low-dose images, the error is most pronounced for EDV and ESV, where the average underestimation is 25%. No bias was observed using the proposed DL de-noising method. De-noising minimized the outliers found for the 1% and 10% low-dose measurements of LVEF and extent. Accuracy of differential diagnosis based on LVEF threshold was highly improved after de-noising. Conclusion. A significant dose reduction can be achieved for cardiac [18F]FDG images used for viability testing in patients with ischemic heart disease without significant loss of diagnostic accuracy when using our DL model for noise reduction. Both 1% and 10% dose reductions are possible with clinically quantitative metrics comparable to that obtained with a full dose.

AB - Introduction. Cardiac [18F]FDG-PET is widely used for viability testing in patients with chronic ischemic heart disease. Guidelines recommend injection of 200-350 MBq [18F]FDG, however, a reduction of radiation exposure has become increasingly important, but might come at the cost of reduced diagnostic accuracy due to the increased noise in the images. We aimed to explore the use of a common deep learning (DL) network for noise reduction in low-dose PET images, and to validate its accuracy using the clinical quantitative metrics used to determine cardiac viability in patients with ischemic heart disease. Methods. We included 168 patients imaged with cardiac [18F]FDG-PET/CT. We simulated a reduced dose by keeping counts at thresholds 1% and 10%. 3D U-net with five blocks was trained to de-noise full PET volumes (128 × 128 × 111). The low-dose and de-noised images were compared in Corridor4DM to the full-dose PET images. We used the default segmentation of the left ventricle to extract the quantitative metrics end-diastolic volume (EDV), end-systolic volume (ESV), and left ventricular ejection fraction (LVEF) from the gated images, and FDG defect extent from the static images. Results. Our de-noising models were able to recover the PET signal for both the static and gated images in either dose-reduction. For the 1% low-dose images, the error is most pronounced for EDV and ESV, where the average underestimation is 25%. No bias was observed using the proposed DL de-noising method. De-noising minimized the outliers found for the 1% and 10% low-dose measurements of LVEF and extent. Accuracy of differential diagnosis based on LVEF threshold was highly improved after de-noising. Conclusion. A significant dose reduction can be achieved for cardiac [18F]FDG images used for viability testing in patients with ischemic heart disease without significant loss of diagnostic accuracy when using our DL model for noise reduction. Both 1% and 10% dose reductions are possible with clinically quantitative metrics comparable to that obtained with a full dose.

KW - Cardiac viability

KW - Convolutional neural network

KW - Deep learning

KW - Low-dose

KW - Pet/ct

UR - http://www.scopus.com/inward/record.url?scp=85101820934&partnerID=8YFLogxK

U2 - 10.1088/1361-6560/abe225

DO - 10.1088/1361-6560/abe225

M3 - Journal article

C2 - 33524958

AN - SCOPUS:85101820934

VL - 66

JO - Physics in Medicine and Biology

JF - Physics in Medicine and Biology

SN - 0031-9155

IS - 5

M1 - 054003

ER -

ID: 303058473