Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects

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Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects. / Marshall, Christian R.; Howrigan, Daniel P.; Merico, Daniele; Thiruvahindrapuram, Bhooma; Wu, Wenting; Greer, Douglas S.; Antaki, Danny; Shetty, Aniket; Holmans, Peter A.; Pinto, Dalila; Gujral, Madhusudan; Brandler, William M.; Malhotra, Dheeraj; Wang, Zhouzhi; Fuentes Fajarado, Karin V.; Maile, Michelle S.; Ripke, Stephan; Agartz, Ingrid; Albus, Margot; Alexander, Madeline; Amin, Farooq; Atkins, Joshua; Bacanu, Silviu A.; Belliveau, Richard A.; Bergen, Sarah E.; Bertalan, Marcelo; Bevilacqua, Elizabeth; Bigdeli, Tim B.; Black, Donald W.; Bruggeman, Richard; Buccola, Nancy G.; Buckner, Randy L.; Bulik-Sullivan, Brendan; Byerley, William; Cahn, Wiepke; Cai, Guiqing; Cairns, Murray J.; Campion, Dominique; Cantor, Rita M.; Carr, Vaughan J.; Carrera, Noa; Catts, Stanley V.; Chambert, Kimberley D.; Cheng, Wei; Hansen, Mark; Hansen, Thomas; Olsen, Line; Pers, Tune H.; Rasmussen, Henrik B.; Werge, Thomas; Scherer, Stephen W.; Neale, Benjamin M; Sebat, Jonathan; CNV and Schizophrenia Working Groups of the Psychiatric Genomics Consortium.

I: Nature Genetics, Bind 49, Nr. 1, 2017, s. 27-35.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

Harvard

Marshall, CR, Howrigan, DP, Merico, D, Thiruvahindrapuram, B, Wu, W, Greer, DS, Antaki, D, Shetty, A, Holmans, PA, Pinto, D, Gujral, M, Brandler, WM, Malhotra, D, Wang, Z, Fuentes Fajarado, KV, Maile, MS, Ripke, S, Agartz, I, Albus, M, Alexander, M, Amin, F, Atkins, J, Bacanu, SA, Belliveau, RA, Bergen, SE, Bertalan, M, Bevilacqua, E, Bigdeli, TB, Black, DW, Bruggeman, R, Buccola, NG, Buckner, RL, Bulik-Sullivan, B, Byerley, W, Cahn, W, Cai, G, Cairns, MJ, Campion, D, Cantor, RM, Carr, VJ, Carrera, N, Catts, SV, Chambert, KD, Cheng, W, Hansen, M, Hansen, T, Olsen, L, Pers, TH, Rasmussen, HB, Werge, T, Scherer, SW, Neale, BM, Sebat, J & CNV and Schizophrenia Working Groups of the Psychiatric Genomics Consortium 2017, 'Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects', Nature Genetics, bind 49, nr. 1, s. 27-35. https://doi.org/10.1038/ng.3725

APA

Marshall, C. R., Howrigan, D. P., Merico, D., Thiruvahindrapuram, B., Wu, W., Greer, D. S., Antaki, D., Shetty, A., Holmans, P. A., Pinto, D., Gujral, M., Brandler, W. M., Malhotra, D., Wang, Z., Fuentes Fajarado, K. V., Maile, M. S., Ripke, S., Agartz, I., Albus, M., ... CNV and Schizophrenia Working Groups of the Psychiatric Genomics Consortium (2017). Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects. Nature Genetics, 49(1), 27-35. https://doi.org/10.1038/ng.3725

Vancouver

Marshall CR, Howrigan DP, Merico D, Thiruvahindrapuram B, Wu W, Greer DS o.a. Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects. Nature Genetics. 2017;49(1):27-35. https://doi.org/10.1038/ng.3725

Author

Marshall, Christian R. ; Howrigan, Daniel P. ; Merico, Daniele ; Thiruvahindrapuram, Bhooma ; Wu, Wenting ; Greer, Douglas S. ; Antaki, Danny ; Shetty, Aniket ; Holmans, Peter A. ; Pinto, Dalila ; Gujral, Madhusudan ; Brandler, William M. ; Malhotra, Dheeraj ; Wang, Zhouzhi ; Fuentes Fajarado, Karin V. ; Maile, Michelle S. ; Ripke, Stephan ; Agartz, Ingrid ; Albus, Margot ; Alexander, Madeline ; Amin, Farooq ; Atkins, Joshua ; Bacanu, Silviu A. ; Belliveau, Richard A. ; Bergen, Sarah E. ; Bertalan, Marcelo ; Bevilacqua, Elizabeth ; Bigdeli, Tim B. ; Black, Donald W. ; Bruggeman, Richard ; Buccola, Nancy G. ; Buckner, Randy L. ; Bulik-Sullivan, Brendan ; Byerley, William ; Cahn, Wiepke ; Cai, Guiqing ; Cairns, Murray J. ; Campion, Dominique ; Cantor, Rita M. ; Carr, Vaughan J. ; Carrera, Noa ; Catts, Stanley V. ; Chambert, Kimberley D. ; Cheng, Wei ; Hansen, Mark ; Hansen, Thomas ; Olsen, Line ; Pers, Tune H. ; Rasmussen, Henrik B. ; Werge, Thomas ; Scherer, Stephen W. ; Neale, Benjamin M ; Sebat, Jonathan ; CNV and Schizophrenia Working Groups of the Psychiatric Genomics Consortium. / Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects. I: Nature Genetics. 2017 ; Bind 49, Nr. 1. s. 27-35.

Bibtex

@article{bac293b3341a414eb99108565852c280,
title = "Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects",
abstract = "Copy number variants (CNVs) have been strongly implicated in the genetic etiology of schizophrenia (SCZ). However, genome-wide investigation of the contribution of CNV to risk has been hampered by limited sample sizes. We sought to address this obstacle by applying a centralized analysis pipeline to a SCZ cohort of 21,094 cases and 20,227 controls. A global enrichment of CNV burden was observed in cases (odds ratio (OR) = 1.11, P = 5.7 × 10-15), which persisted after excluding loci implicated in previous studies (OR = 1.07, P = 1.7 × 10-6). CNV burden was enriched for genes associated with synaptic function (OR = 1.68, P = 2.8 × 10-11) and neurobehavioral phenotypes in mouse (OR = 1.18, P = 7.3 × 10-5). Genome-wide significant evidence was obtained for eight loci, including 1q21.1, 2p16.3 (NRXN1), 3q29, 7q11.2, 15q13.3, distal 16p11.2, proximal 16p11.2 and 22q11.2. Suggestive support was found for eight additional candidate susceptibility and protective loci, which consisted predominantly of CNVs mediated by nonallelic homologous recombination.",
author = "Marshall, {Christian R.} and Howrigan, {Daniel P.} and Daniele Merico and Bhooma Thiruvahindrapuram and Wenting Wu and Greer, {Douglas S.} and Danny Antaki and Aniket Shetty and Holmans, {Peter A.} and Dalila Pinto and Madhusudan Gujral and Brandler, {William M.} and Dheeraj Malhotra and Zhouzhi Wang and {Fuentes Fajarado}, {Karin V.} and Maile, {Michelle S.} and Stephan Ripke and Ingrid Agartz and Margot Albus and Madeline Alexander and Farooq Amin and Joshua Atkins and Bacanu, {Silviu A.} and Belliveau, {Richard A.} and Bergen, {Sarah E.} and Marcelo Bertalan and Elizabeth Bevilacqua and Bigdeli, {Tim B.} and Black, {Donald W.} and Richard Bruggeman and Buccola, {Nancy G.} and Buckner, {Randy L.} and Brendan Bulik-Sullivan and William Byerley and Wiepke Cahn and Guiqing Cai and Cairns, {Murray J.} and Dominique Campion and Cantor, {Rita M.} and Carr, {Vaughan J.} and Noa Carrera and Catts, {Stanley V.} and Chambert, {Kimberley D.} and Wei Cheng and Mark Hansen and Thomas Hansen and Line Olsen and Pers, {Tune H.} and Rasmussen, {Henrik B.} and Thomas Werge and Scherer, {Stephen W.} and Neale, {Benjamin M} and Jonathan Sebat and {CNV and Schizophrenia Working Groups of the Psychiatric Genomics Consortium}",
year = "2017",
doi = "10.1038/ng.3725",
language = "English",
volume = "49",
pages = "27--35",
journal = "Nature Genetics",
issn = "1061-4036",
publisher = "nature publishing group",
number = "1",

}

RIS

TY - JOUR

T1 - Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects

AU - Marshall, Christian R.

AU - Howrigan, Daniel P.

AU - Merico, Daniele

AU - Thiruvahindrapuram, Bhooma

AU - Wu, Wenting

AU - Greer, Douglas S.

AU - Antaki, Danny

AU - Shetty, Aniket

AU - Holmans, Peter A.

AU - Pinto, Dalila

AU - Gujral, Madhusudan

AU - Brandler, William M.

AU - Malhotra, Dheeraj

AU - Wang, Zhouzhi

AU - Fuentes Fajarado, Karin V.

AU - Maile, Michelle S.

AU - Ripke, Stephan

AU - Agartz, Ingrid

AU - Albus, Margot

AU - Alexander, Madeline

AU - Amin, Farooq

AU - Atkins, Joshua

AU - Bacanu, Silviu A.

AU - Belliveau, Richard A.

AU - Bergen, Sarah E.

AU - Bertalan, Marcelo

AU - Bevilacqua, Elizabeth

AU - Bigdeli, Tim B.

AU - Black, Donald W.

AU - Bruggeman, Richard

AU - Buccola, Nancy G.

AU - Buckner, Randy L.

AU - Bulik-Sullivan, Brendan

AU - Byerley, William

AU - Cahn, Wiepke

AU - Cai, Guiqing

AU - Cairns, Murray J.

AU - Campion, Dominique

AU - Cantor, Rita M.

AU - Carr, Vaughan J.

AU - Carrera, Noa

AU - Catts, Stanley V.

AU - Chambert, Kimberley D.

AU - Cheng, Wei

AU - Hansen, Mark

AU - Hansen, Thomas

AU - Olsen, Line

AU - Pers, Tune H.

AU - Rasmussen, Henrik B.

AU - Werge, Thomas

AU - Scherer, Stephen W.

AU - Neale, Benjamin M

AU - Sebat, Jonathan

AU - CNV and Schizophrenia Working Groups of the Psychiatric Genomics Consortium

PY - 2017

Y1 - 2017

N2 - Copy number variants (CNVs) have been strongly implicated in the genetic etiology of schizophrenia (SCZ). However, genome-wide investigation of the contribution of CNV to risk has been hampered by limited sample sizes. We sought to address this obstacle by applying a centralized analysis pipeline to a SCZ cohort of 21,094 cases and 20,227 controls. A global enrichment of CNV burden was observed in cases (odds ratio (OR) = 1.11, P = 5.7 × 10-15), which persisted after excluding loci implicated in previous studies (OR = 1.07, P = 1.7 × 10-6). CNV burden was enriched for genes associated with synaptic function (OR = 1.68, P = 2.8 × 10-11) and neurobehavioral phenotypes in mouse (OR = 1.18, P = 7.3 × 10-5). Genome-wide significant evidence was obtained for eight loci, including 1q21.1, 2p16.3 (NRXN1), 3q29, 7q11.2, 15q13.3, distal 16p11.2, proximal 16p11.2 and 22q11.2. Suggestive support was found for eight additional candidate susceptibility and protective loci, which consisted predominantly of CNVs mediated by nonallelic homologous recombination.

AB - Copy number variants (CNVs) have been strongly implicated in the genetic etiology of schizophrenia (SCZ). However, genome-wide investigation of the contribution of CNV to risk has been hampered by limited sample sizes. We sought to address this obstacle by applying a centralized analysis pipeline to a SCZ cohort of 21,094 cases and 20,227 controls. A global enrichment of CNV burden was observed in cases (odds ratio (OR) = 1.11, P = 5.7 × 10-15), which persisted after excluding loci implicated in previous studies (OR = 1.07, P = 1.7 × 10-6). CNV burden was enriched for genes associated with synaptic function (OR = 1.68, P = 2.8 × 10-11) and neurobehavioral phenotypes in mouse (OR = 1.18, P = 7.3 × 10-5). Genome-wide significant evidence was obtained for eight loci, including 1q21.1, 2p16.3 (NRXN1), 3q29, 7q11.2, 15q13.3, distal 16p11.2, proximal 16p11.2 and 22q11.2. Suggestive support was found for eight additional candidate susceptibility and protective loci, which consisted predominantly of CNVs mediated by nonallelic homologous recombination.

U2 - 10.1038/ng.3725

DO - 10.1038/ng.3725

M3 - Journal article

C2 - 27869829

AN - SCOPUS:84997770295

VL - 49

SP - 27

EP - 35

JO - Nature Genetics

JF - Nature Genetics

SN - 1061-4036

IS - 1

ER -

ID: 196767292