Standard
The Amborella Genome and the Evolution of Flowering Plants. / Albert, Victor A.; Barbazuk, W. Bradley; dePamphilis, Claude W.; Der, Joshua P.; Leebens-Mack, James; Ma, Hong; Palmer, Jeffrey D.; Rounsley, Steve; Sankoff, David; Schuster, Stephan C.; Soltis, Douglas E.; Soltis, Pamela S.; Wessler, Susan R.; Wing, Rod A.; Albert, Victor A.; Ammiraju, Jetty S. S.; Barbazuk, W. Bradley; Chamala, Srikar; Chanderbali, Andre S.; dePamphilis, Claude W.; Der, Joshua P.; Determann, Ronald; Leebens-Mack, James; Ma, Hong; Ralph, Paula; Rounsley, Steve; Schuster, Stephan C.; Soltis, Douglas E.; Soltis, Pamela S.; Talag, Jason; Tomsho, Lynn; Walts, Brandon; Wanke, Stefan; Wing, Rod A.; Albert, Victor A.; Barbazuk, W. Bradley; Chamala, Srikar; Chanderbali, Andre S.; Chang, Tien-Hao; Determann, Ronald; Lan, Tianying; Soltis, Douglas E.; Soltis, Pamela S.; Arikit, Siwaret; Axtell, Michael J.; Ayyampalayam, Saravanaraj; Barbazuk, W. Bradley; Burnette III, James M.; Chamala, Srikar; De Paoli, Emanuele; dePamphilis, Claude W.; Der, Joshua P.; Estill, James C.; Farrell, Nina P.; Harkess, Alex; Jiao, Yuannian; Leebens-Mack, James; Liu, Kun; Mei, Wenbin; Meyers, Blake C.; Shahid, Saima; Wafula, Eric; Walts, Brandon; Wessler, Susan R.; Zhai, Jixian; Zhang, Xiaoyu; Albert, Victor A.; Carretero-Paulet, Lorenzo; dePamphilis, Claude W.; Der, Joshua P.; Jiao, Yuannian; Leebens-Mack, James; Lyons, Eric; Sankoff, David; Tang, Haibao; Wafula, Eric; Zheng, Chunfang; Albert, Victor A.; Altman, Naomi S.; Barbazuk, W. Bradley; Carretero-Paulet, Lorenzo; dePamphilis, Claude W.; Der, Joshua P.; Estill, James C.; Jiao, Yuannian; Leebens-Mack, James; Liu, Kun; Mei, Wenbin; Wafula, Eric; Altman, Naomi S.; Arikit, Siwaret; Axtell, Michael J.; Chamala, Srikar; Chanderbali, Andre S.; Chen, Feng; Chen, Jian-Qun; Chiang, Vincent; De Paoli, Emanuele; dePamphilis, Claude W.; Der, Joshua P.; Determann, Ronald; Fogliani, Bruno; Guo, Chunce; Harholt, Jesper; Harkess, Alex; Job, Claudette; Job, Dominique; Kim, Sangtae; Kong, Hongzhi; Leebens-Mack, James; Li, Guanglin; Li, Lin; Liu, Jie; Ma, Hong; Meyers, Blake C.; Park, Jongsun; Qi, Xinshuai; Rajjou, Loic; Burtet-Sarramegna, Valerie; Sederoff, Ron; Shahid, Saima; Soltis, Douglas E.; Soltis, Pamela S.; Sun, Ying-Hsuan; Ulvskov, Peter; Villegente, Matthieu; Xue, Jia-Yu; Yeh, Ting-Feng; Yu, Xianxian; Zhai, Jixian; Acosta, Juan J.; Albert, Victor A.; Barbazuk, W. Bradley; Bruenn, Riva A.; Chamala, Srikar; de Kochko, Alexandre; dePamphilis, Claude W.; Der, Joshua P.; Herrera-Estrella, Luis R.; Ibarra-Laclette, Enrique; Kirst, Matias; Leebens-Mack, James; Pissis, Solon P.; Poncet, Valerie; Schuster, Stephan C.; Soltis, Douglas E.; Soltis, Pamela S.; Tomsho, Lynn; Project, Amborella Genome.
In:
Science, Vol. 342, No. 6165, 1241089, 20.12.2013.
Research output: Contribution to journal › Journal article › Research › peer-review
Harvard
Albert, VA, Barbazuk, WB, dePamphilis, CW, Der, JP, Leebens-Mack, J, Ma, H, Palmer, JD, Rounsley, S, Sankoff, D, Schuster, SC, Soltis, DE, Soltis, PS, Wessler, SR, Wing, RA, Albert, VA, Ammiraju, JSS, Barbazuk, WB, Chamala, S, Chanderbali, AS, dePamphilis, CW, Der, JP, Determann, R, Leebens-Mack, J, Ma, H, Ralph, P, Rounsley, S, Schuster, SC, Soltis, DE, Soltis, PS, Talag, J, Tomsho, L, Walts, B, Wanke, S, Wing, RA, Albert, VA, Barbazuk, WB, Chamala, S, Chanderbali, AS, Chang, T-H, Determann, R, Lan, T, Soltis, DE, Soltis, PS, Arikit, S, Axtell, MJ, Ayyampalayam, S, Barbazuk, WB, Burnette III, JM, Chamala, S, De Paoli, E, dePamphilis, CW, Der, JP, Estill, JC, Farrell, NP, Harkess, A, Jiao, Y, Leebens-Mack, J, Liu, K, Mei, W, Meyers, BC, Shahid, S, Wafula, E, Walts, B, Wessler, SR, Zhai, J, Zhang, X, Albert, VA, Carretero-Paulet, L, dePamphilis, CW, Der, JP, Jiao, Y, Leebens-Mack, J, Lyons, E, Sankoff, D, Tang, H, Wafula, E, Zheng, C, Albert, VA, Altman, NS, Barbazuk, WB, Carretero-Paulet, L, dePamphilis, CW, Der, JP, Estill, JC, Jiao, Y, Leebens-Mack, J, Liu, K, Mei, W, Wafula, E, Altman, NS, Arikit, S, Axtell, MJ, Chamala, S, Chanderbali, AS, Chen, F, Chen, J-Q, Chiang, V, De Paoli, E, dePamphilis, CW, Der, JP, Determann, R, Fogliani, B, Guo, C, Harholt, J, Harkess, A, Job, C, Job, D, Kim, S, Kong, H, Leebens-Mack, J, Li, G, Li, L, Liu, J, Ma, H, Meyers, BC, Park, J, Qi, X, Rajjou, L, Burtet-Sarramegna, V, Sederoff, R, Shahid, S, Soltis, DE, Soltis, PS, Sun, Y-H
, Ulvskov, P, Villegente, M, Xue, J-Y, Yeh, T-F, Yu, X, Zhai, J, Acosta, JJ, Albert, VA, Barbazuk, WB, Bruenn, RA, Chamala, S, de Kochko, A, dePamphilis, CW, Der, JP, Herrera-Estrella, LR, Ibarra-Laclette, E, Kirst, M, Leebens-Mack, J, Pissis, SP, Poncet, V, Schuster, SC, Soltis, DE, Soltis, PS, Tomsho, L & Project, AG 2013, '
The Amborella Genome and the Evolution of Flowering Plants',
Science, vol. 342, no. 6165, 1241089.
https://doi.org/10.1126/science.1241089APA
Albert, V. A., Barbazuk, W. B., dePamphilis, C. W., Der, J. P., Leebens-Mack, J., Ma, H., Palmer, J. D., Rounsley, S., Sankoff, D., Schuster, S. C., Soltis, D. E., Soltis, P. S., Wessler, S. R., Wing, R. A., Albert, V. A., Ammiraju, J. S. S., Barbazuk, W. B., Chamala, S., Chanderbali, A. S., ... Project, A. G. (2013).
The Amborella Genome and the Evolution of Flowering Plants.
Science,
342(6165), [1241089].
https://doi.org/10.1126/science.1241089Vancouver
Albert VA, Barbazuk WB, dePamphilis CW, Der JP, Leebens-Mack J, Ma H et al.
The Amborella Genome and the Evolution of Flowering Plants.
Science. 2013 Dec 20;342(6165). 1241089.
https://doi.org/10.1126/science.1241089Author
Albert, Victor A. ; Barbazuk, W. Bradley ; dePamphilis, Claude W. ; Der, Joshua P. ; Leebens-Mack, James ; Ma, Hong ; Palmer, Jeffrey D. ; Rounsley, Steve ; Sankoff, David ; Schuster, Stephan C. ; Soltis, Douglas E. ; Soltis, Pamela S. ; Wessler, Susan R. ; Wing, Rod A. ; Albert, Victor A. ; Ammiraju, Jetty S. S. ; Barbazuk, W. Bradley ; Chamala, Srikar ; Chanderbali, Andre S. ; dePamphilis, Claude W. ; Der, Joshua P. ; Determann, Ronald ; Leebens-Mack, James ; Ma, Hong ; Ralph, Paula ; Rounsley, Steve ; Schuster, Stephan C. ; Soltis, Douglas E. ; Soltis, Pamela S. ; Talag, Jason ; Tomsho, Lynn ; Walts, Brandon ; Wanke, Stefan ; Wing, Rod A. ; Albert, Victor A. ; Barbazuk, W. Bradley ; Chamala, Srikar ; Chanderbali, Andre S. ; Chang, Tien-Hao ; Determann, Ronald ; Lan, Tianying ; Soltis, Douglas E. ; Soltis, Pamela S. ; Arikit, Siwaret ; Axtell, Michael J. ; Ayyampalayam, Saravanaraj ; Barbazuk, W. Bradley ; Burnette III, James M. ; Chamala, Srikar ; De Paoli, Emanuele ; dePamphilis, Claude W. ; Der, Joshua P. ; Estill, James C. ; Farrell, Nina P. ; Harkess, Alex ; Jiao, Yuannian ; Leebens-Mack, James ; Liu, Kun ; Mei, Wenbin ; Meyers, Blake C. ; Shahid, Saima ; Wafula, Eric ; Walts, Brandon ; Wessler, Susan R. ; Zhai, Jixian ; Zhang, Xiaoyu ; Albert, Victor A. ; Carretero-Paulet, Lorenzo ; dePamphilis, Claude W. ; Der, Joshua P. ; Jiao, Yuannian ; Leebens-Mack, James ; Lyons, Eric ; Sankoff, David ; Tang, Haibao ; Wafula, Eric ; Zheng, Chunfang ; Albert, Victor A. ; Altman, Naomi S. ; Barbazuk, W. Bradley ; Carretero-Paulet, Lorenzo ; dePamphilis, Claude W. ; Der, Joshua P. ; Estill, James C. ; Jiao, Yuannian ; Leebens-Mack, James ; Liu, Kun ; Mei, Wenbin ; Wafula, Eric ; Altman, Naomi S. ; Arikit, Siwaret ; Axtell, Michael J. ; Chamala, Srikar ; Chanderbali, Andre S. ; Chen, Feng ; Chen, Jian-Qun ; Chiang, Vincent ; De Paoli, Emanuele ; dePamphilis, Claude W. ; Der, Joshua P. ; Determann, Ronald ; Fogliani, Bruno ; Guo, Chunce ; Harholt, Jesper ; Harkess, Alex ; Job, Claudette ; Job, Dominique ; Kim, Sangtae ; Kong, Hongzhi ; Leebens-Mack, James ; Li, Guanglin ; Li, Lin ; Liu, Jie ; Ma, Hong ; Meyers, Blake C. ; Park, Jongsun ; Qi, Xinshuai ; Rajjou, Loic ; Burtet-Sarramegna, Valerie ; Sederoff, Ron ; Shahid, Saima ; Soltis, Douglas E. ; Soltis, Pamela S. ; Sun, Ying-Hsuan ; Ulvskov, Peter ; Villegente, Matthieu ; Xue, Jia-Yu ; Yeh, Ting-Feng ; Yu, Xianxian ; Zhai, Jixian ; Acosta, Juan J. ; Albert, Victor A. ; Barbazuk, W. Bradley ; Bruenn, Riva A. ; Chamala, Srikar ; de Kochko, Alexandre ; dePamphilis, Claude W. ; Der, Joshua P. ; Herrera-Estrella, Luis R. ; Ibarra-Laclette, Enrique ; Kirst, Matias ; Leebens-Mack, James ; Pissis, Solon P. ; Poncet, Valerie ; Schuster, Stephan C. ; Soltis, Douglas E. ; Soltis, Pamela S. ; Tomsho, Lynn ; Project, Amborella Genome. / The Amborella Genome and the Evolution of Flowering Plants. In: Science. 2013 ; Vol. 342, No. 6165.
Bibtex
@article{922594c3e5a94fc9a2038f012c2af86b,
title = "The Amborella Genome and the Evolution of Flowering Plants",
abstract = "Amborella trichopoda is strongly supported as the single living species of the sister lineage to all other extant flowering plants, providing a unique reference for inferring the genome content and structure of the most recent common ancestor (MRCA) of living angiosperms. Sequencing the Amborella genome, we identified an ancient genome duplication predating angiosperm diversification, without evidence of subsequent, lineage-specific genome duplications. Comparisons between Amborella and other angiosperms facilitated reconstruction of the ancestral angiosperm gene content and gene order in the MRCA of core eudicots. We identify new gene families, gene duplications, and floral protein-protein interactions that first appeared in the ancestral angiosperm. Transposable elements in Amborella are ancient and highly divergent, with no recent transposon radiations. Population genomic analysis across Amborella's native range in New Caledonia reveals a recent genetic bottleneck and geographic structure with conservation implications.",
author = "Albert, {Victor A.} and Barbazuk, {W. Bradley} and dePamphilis, {Claude W.} and Der, {Joshua P.} and James Leebens-Mack and Hong Ma and Palmer, {Jeffrey D.} and Steve Rounsley and David Sankoff and Schuster, {Stephan C.} and Soltis, {Douglas E.} and Soltis, {Pamela S.} and Wessler, {Susan R.} and Wing, {Rod A.} and Albert, {Victor A.} and Ammiraju, {Jetty S. S.} and Barbazuk, {W. Bradley} and Srikar Chamala and Chanderbali, {Andre S.} and dePamphilis, {Claude W.} and Der, {Joshua P.} and Ronald Determann and James Leebens-Mack and Hong Ma and Paula Ralph and Steve Rounsley and Schuster, {Stephan C.} and Soltis, {Douglas E.} and Soltis, {Pamela S.} and Jason Talag and Lynn Tomsho and Brandon Walts and Stefan Wanke and Wing, {Rod A.} and Albert, {Victor A.} and Barbazuk, {W. Bradley} and Srikar Chamala and Chanderbali, {Andre S.} and Tien-Hao Chang and Ronald Determann and Tianying Lan and Soltis, {Douglas E.} and Soltis, {Pamela S.} and Siwaret Arikit and Axtell, {Michael J.} and Saravanaraj Ayyampalayam and Barbazuk, {W. Bradley} and {Burnette III}, {James M.} and Srikar Chamala and {De Paoli}, Emanuele and dePamphilis, {Claude W.} and Der, {Joshua P.} and Estill, {James C.} and Farrell, {Nina P.} and Alex Harkess and Yuannian Jiao and James Leebens-Mack and Kun Liu and Wenbin Mei and Meyers, {Blake C.} and Saima Shahid and Eric Wafula and Brandon Walts and Wessler, {Susan R.} and Jixian Zhai and Xiaoyu Zhang and Albert, {Victor A.} and Lorenzo Carretero-Paulet and dePamphilis, {Claude W.} and Der, {Joshua P.} and Yuannian Jiao and James Leebens-Mack and Eric Lyons and David Sankoff and Haibao Tang and Eric Wafula and Chunfang Zheng and Albert, {Victor A.} and Altman, {Naomi S.} and Barbazuk, {W. Bradley} and Lorenzo Carretero-Paulet and dePamphilis, {Claude W.} and Der, {Joshua P.} and Estill, {James C.} and Yuannian Jiao and James Leebens-Mack and Kun Liu and Wenbin Mei and Eric Wafula and Altman, {Naomi S.} and Siwaret Arikit and Axtell, {Michael J.} and Srikar Chamala and Chanderbali, {Andre S.} and Feng Chen and Jian-Qun Chen and Vincent Chiang and {De Paoli}, Emanuele and dePamphilis, {Claude W.} and Der, {Joshua P.} and Ronald Determann and Bruno Fogliani and Chunce Guo and Jesper Harholt and Alex Harkess and Claudette Job and Dominique Job and Sangtae Kim and Hongzhi Kong and James Leebens-Mack and Guanglin Li and Lin Li and Jie Liu and Hong Ma and Meyers, {Blake C.} and Jongsun Park and Xinshuai Qi and Loic Rajjou and Valerie Burtet-Sarramegna and Ron Sederoff and Saima Shahid and Soltis, {Douglas E.} and Soltis, {Pamela S.} and Ying-Hsuan Sun and Peter Ulvskov and Matthieu Villegente and Jia-Yu Xue and Ting-Feng Yeh and Xianxian Yu and Jixian Zhai and Acosta, {Juan J.} and Albert, {Victor A.} and Barbazuk, {W. Bradley} and Bruenn, {Riva A.} and Srikar Chamala and {de Kochko}, Alexandre and dePamphilis, {Claude W.} and Der, {Joshua P.} and Herrera-Estrella, {Luis R.} and Enrique Ibarra-Laclette and Matias Kirst and James Leebens-Mack and Pissis, {Solon P.} and Valerie Poncet and Schuster, {Stephan C.} and Soltis, {Douglas E.} and Soltis, {Pamela S.} and Lynn Tomsho and Project, {Amborella Genome}",
year = "2013",
month = dec,
day = "20",
doi = "10.1126/science.1241089",
language = "English",
volume = "342",
journal = "Science",
issn = "0036-8075",
publisher = "American Association for the Advancement of Science",
number = "6165",
}
RIS
TY - JOUR
T1 - The Amborella Genome and the Evolution of Flowering Plants
AU - Albert, Victor A.
AU - Barbazuk, W. Bradley
AU - dePamphilis, Claude W.
AU - Der, Joshua P.
AU - Leebens-Mack, James
AU - Ma, Hong
AU - Palmer, Jeffrey D.
AU - Rounsley, Steve
AU - Sankoff, David
AU - Schuster, Stephan C.
AU - Soltis, Douglas E.
AU - Soltis, Pamela S.
AU - Wessler, Susan R.
AU - Wing, Rod A.
AU - Albert, Victor A.
AU - Ammiraju, Jetty S. S.
AU - Barbazuk, W. Bradley
AU - Chamala, Srikar
AU - Chanderbali, Andre S.
AU - dePamphilis, Claude W.
AU - Der, Joshua P.
AU - Determann, Ronald
AU - Leebens-Mack, James
AU - Ma, Hong
AU - Ralph, Paula
AU - Rounsley, Steve
AU - Schuster, Stephan C.
AU - Soltis, Douglas E.
AU - Soltis, Pamela S.
AU - Talag, Jason
AU - Tomsho, Lynn
AU - Walts, Brandon
AU - Wanke, Stefan
AU - Wing, Rod A.
AU - Albert, Victor A.
AU - Barbazuk, W. Bradley
AU - Chamala, Srikar
AU - Chanderbali, Andre S.
AU - Chang, Tien-Hao
AU - Determann, Ronald
AU - Lan, Tianying
AU - Soltis, Douglas E.
AU - Soltis, Pamela S.
AU - Arikit, Siwaret
AU - Axtell, Michael J.
AU - Ayyampalayam, Saravanaraj
AU - Barbazuk, W. Bradley
AU - Burnette III, James M.
AU - Chamala, Srikar
AU - De Paoli, Emanuele
AU - dePamphilis, Claude W.
AU - Der, Joshua P.
AU - Estill, James C.
AU - Farrell, Nina P.
AU - Harkess, Alex
AU - Jiao, Yuannian
AU - Leebens-Mack, James
AU - Liu, Kun
AU - Mei, Wenbin
AU - Meyers, Blake C.
AU - Shahid, Saima
AU - Wafula, Eric
AU - Walts, Brandon
AU - Wessler, Susan R.
AU - Zhai, Jixian
AU - Zhang, Xiaoyu
AU - Albert, Victor A.
AU - Carretero-Paulet, Lorenzo
AU - dePamphilis, Claude W.
AU - Der, Joshua P.
AU - Jiao, Yuannian
AU - Leebens-Mack, James
AU - Lyons, Eric
AU - Sankoff, David
AU - Tang, Haibao
AU - Wafula, Eric
AU - Zheng, Chunfang
AU - Albert, Victor A.
AU - Altman, Naomi S.
AU - Barbazuk, W. Bradley
AU - Carretero-Paulet, Lorenzo
AU - dePamphilis, Claude W.
AU - Der, Joshua P.
AU - Estill, James C.
AU - Jiao, Yuannian
AU - Leebens-Mack, James
AU - Liu, Kun
AU - Mei, Wenbin
AU - Wafula, Eric
AU - Altman, Naomi S.
AU - Arikit, Siwaret
AU - Axtell, Michael J.
AU - Chamala, Srikar
AU - Chanderbali, Andre S.
AU - Chen, Feng
AU - Chen, Jian-Qun
AU - Chiang, Vincent
AU - De Paoli, Emanuele
AU - dePamphilis, Claude W.
AU - Der, Joshua P.
AU - Determann, Ronald
AU - Fogliani, Bruno
AU - Guo, Chunce
AU - Harholt, Jesper
AU - Harkess, Alex
AU - Job, Claudette
AU - Job, Dominique
AU - Kim, Sangtae
AU - Kong, Hongzhi
AU - Leebens-Mack, James
AU - Li, Guanglin
AU - Li, Lin
AU - Liu, Jie
AU - Ma, Hong
AU - Meyers, Blake C.
AU - Park, Jongsun
AU - Qi, Xinshuai
AU - Rajjou, Loic
AU - Burtet-Sarramegna, Valerie
AU - Sederoff, Ron
AU - Shahid, Saima
AU - Soltis, Douglas E.
AU - Soltis, Pamela S.
AU - Sun, Ying-Hsuan
AU - Ulvskov, Peter
AU - Villegente, Matthieu
AU - Xue, Jia-Yu
AU - Yeh, Ting-Feng
AU - Yu, Xianxian
AU - Zhai, Jixian
AU - Acosta, Juan J.
AU - Albert, Victor A.
AU - Barbazuk, W. Bradley
AU - Bruenn, Riva A.
AU - Chamala, Srikar
AU - de Kochko, Alexandre
AU - dePamphilis, Claude W.
AU - Der, Joshua P.
AU - Herrera-Estrella, Luis R.
AU - Ibarra-Laclette, Enrique
AU - Kirst, Matias
AU - Leebens-Mack, James
AU - Pissis, Solon P.
AU - Poncet, Valerie
AU - Schuster, Stephan C.
AU - Soltis, Douglas E.
AU - Soltis, Pamela S.
AU - Tomsho, Lynn
AU - Project, Amborella Genome
PY - 2013/12/20
Y1 - 2013/12/20
N2 - Amborella trichopoda is strongly supported as the single living species of the sister lineage to all other extant flowering plants, providing a unique reference for inferring the genome content and structure of the most recent common ancestor (MRCA) of living angiosperms. Sequencing the Amborella genome, we identified an ancient genome duplication predating angiosperm diversification, without evidence of subsequent, lineage-specific genome duplications. Comparisons between Amborella and other angiosperms facilitated reconstruction of the ancestral angiosperm gene content and gene order in the MRCA of core eudicots. We identify new gene families, gene duplications, and floral protein-protein interactions that first appeared in the ancestral angiosperm. Transposable elements in Amborella are ancient and highly divergent, with no recent transposon radiations. Population genomic analysis across Amborella's native range in New Caledonia reveals a recent genetic bottleneck and geographic structure with conservation implications.
AB - Amborella trichopoda is strongly supported as the single living species of the sister lineage to all other extant flowering plants, providing a unique reference for inferring the genome content and structure of the most recent common ancestor (MRCA) of living angiosperms. Sequencing the Amborella genome, we identified an ancient genome duplication predating angiosperm diversification, without evidence of subsequent, lineage-specific genome duplications. Comparisons between Amborella and other angiosperms facilitated reconstruction of the ancestral angiosperm gene content and gene order in the MRCA of core eudicots. We identify new gene families, gene duplications, and floral protein-protein interactions that first appeared in the ancestral angiosperm. Transposable elements in Amborella are ancient and highly divergent, with no recent transposon radiations. Population genomic analysis across Amborella's native range in New Caledonia reveals a recent genetic bottleneck and geographic structure with conservation implications.
U2 - 10.1126/science.1241089
DO - 10.1126/science.1241089
M3 - Journal article
C2 - 24357323
VL - 342
JO - Science
JF - Science
SN - 0036-8075
IS - 6165
M1 - 1241089
ER -
