Shanlin Liu

Shanlin Liu

Visiting researcher


  1. 2023
  2. E-pub ahead of print

    Population genomics of the muskox' resilience in the near absence of genetic variation

    Chrzanová Pecnerová, Patrícia, Lord, E., Garcia Erill, Genís, Hanghøj, Kristian Ebbesen, Rasmussen, Malthe Sebro, Meisner, Jonas, Liu, Xiaodong, van der Valk, T., Santander, Cindy Gilda, Quinn, Liam James Elgaard, Lin, Long, Liu, Shanlin, Carøe, C., Dalerum, F., Götherström, A., Måsviken, J., Vartanyan, S., Raundrup, K., Al-Chaer, Amal, Rasmussen, Linett, Hvilsom, C., Heide-Jørgensen, M. P., Sinding, Mikkel Holger Strander, Aastrup, P., Van Coeverden de Groot, P. J., Schmidt, N. M., Albrechtsen, Anders, Dalén, L., Heller, Rasmus, Moltke, Ida & Siegismund, Hans Redlef, 2023, (E-pub ahead of print) In: Molecular Ecology.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. 2022
  4. Published

    The population genomic legacy of the second plague pandemic

    Gopalakrishnan, Shyam, Ebenesersdóttir, S. S., Lundstrøm, I. K. C., Turner-Walker, G., Moore, K. H. S., Luisi, P., Margaryan, Ashot, Martin, M. D., Ellegaard, M. R., Magnússon, Ó., Sigurðsson, Á., Snorradóttir, S., Magnúsdóttir, D. N., Laffoon, J. E., van Dorp, L., Liu, Xiaodong, Moltke, Ida, Ávila-Arcos, M. C., Schraiber, J. G., Rasmussen, Simon, Juan, D., Gelabert, P., de-Dios, T., Fotaki, Anna Katerina, Iraeta Orbegozo, Miren, Vågene, Åshild Joanne, Denham, S. D., Christophersen, A., Stenøien, H. K., Vieira, F. G., Liu, Shanlin, Günther, T., Kivisild, T., Moseng, O. G., Skar, B., Cheung, C., Sandoval-Velasco, Marcela, Wales, N., Schroeder, Hannes, Campos, P. F., Guðmundsdóttir, V. B., Sicheritz-Pontén, Thomas, Petersen, Bent, Halgunset, J., Gilbert, E., Cavalleri, G. L., Hovig, E., Kockum, I., Olsson, T., Alfredsson, L., Hansen, Thomas Folkmann, Werge, Thomas, Willerslev, Eske, Balloux, F., Marques-Bonet, T., Lalueza-Fox, C., Nielsen, Rasmus, Stefánsson, K., Helgason, A. & Gilbert, M Thomas P, 2022, In: Current Biology. 32, 21, p. 4743-4751.e6

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. 2021
  6. Published

    Ancient and modern genomes unravel the evolutionary history of the rhinoceros family

    Liu, Shanlin, Westbury, Michael Vincent, Dussex, N., Mitchell, K. J., Sinding, Mikkel Holger Strander, Heintzman, P. D., Duchene, David, Kapp, J. D., von Seth, J., Heiniger, H., Sánchez-Barreiro, F., Margaryan, Ashot, André-Olsen, R., Westbury, Binia De Cahsan, Meng, G., Yang, C., Chen, L., van der Valk, T., Moodley, Y., Rookmaaker, K., Bruford, M. W., Ryder, O., Steiner, C., Sonsbeek, L. G. R. B., Vartanyan, S., Guo, C., Cooper, A., Kosintsev, P., Kirillova, I., Lister, A. M., Marques-Bonet, T., Gopalakrishnan, Shyam, Dunn, Rob, Lorenzen, Eline, Shapiro, B., KU, thw266, Antoine, P. O., Dalén, L. & Gilbert, M Thomas P, 2021, In: Cell. 184, 19, p. 4874-4885.e16

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Genomic insights into the conservation status of the world's last remaining Sumatran rhinoceros populations

    von Seth, J., Dussex, N., Diez-del-Molino, D., van der Valk, T., Kutschera, V. E., Kierczak, M., Steiner, C. C., Liu, Shanlin, Gilbert, M Thomas P, Sinding, Mikkel Holger Strander, Prost, S., Guschanski, K., Nathan, S. K. S. S., Brace, S., Chan, Y. L., Wheat, C. W., Skoglund, P., Ryder, O. A., Goossens, B., Gotherstrom, A. & Dalen, L., 2021, In: Nature Communications. 12, 1, 11 p., 2393.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. 2020
  9. Published

    Historical isolation facilitates species radiation by sexual selection: Insights from Chorthippus grasshoppers

    Nolen, Z. J., Yildirim, B., Irisarri, I., Liu, Shanlin, Groot Crego, C., Amby, Daniel Buchvaldt, Mayer, F., Gilbert, M Thomas P & Pereira, R. J., 2020, In: Molecular Ecology. 29, 24, p. 4985-5002

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Phylogeny of Neotropical Seirinae (Collembola, Entomobryidae) based on mitochondrial genomes

    Godeiro, N. N., Antunes Pacheco, George, Liu, Shanlin, Gioia Cipola, N., Berbel-Filho, W. M., Zhang, F., Gilbert, M Thomas P & Bellini, B. C., 2020, In: Zoologica Scripta. 49, 3, p. 329-339

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Recent mitochondrial lineage extinction in the critically endangered Javan rhinoceros

    Margaryan, Ashot, Sinding, Mikkel Holger Strander, Liu, Shanlin, Vieira, F. G., Chan, Y. L., Nathan, S. K. S. S., Moodley, Y., Bruford, M. W. & Gilbert, M Thomas P, 2020, In: Zoological Journal of the Linnean Society. 190, 1, p. 372-383 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    The evolutionary history of extinct and living lions

    de Manuel, M., Barnett, R., Sandoval-Velasco, Marcela, Yamaguchi, N., Vieira, F. G., Mendoza, M. L. Z., Liu, S., Martin, M. D., Sinding, M. S., Mak, Sarah Siu Tze, Caroe, C., Liu, Shanlin, Guo, C., Zheng, J., Zazula, G., Baryshnikov, G., Eizirik, E., Koepfli, K., Johnson, W. E., Antunes, A., Sicheritz-Pontén, Thomas, Gopalakrishnan, Shyam, Larson, G., Yang, H., O'Brien, S. J., Hansen, Anders Johannes, KU, thw266, Marques-Bonet, T. & Gilbert, M Thomas P, 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 20, p. 10927-10934 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. 2019
  14. Published

    Evolutionary history of Polyneoptera and its implications for our understanding of early winged insects

    Wipfler, B., Letsch, H., Frandsen, P. B., Kapli, P., Mayer, C., Bartel, D., Buckley, T. R., Donath, A., Edgerly-Rooks, J. S., Fujita, M., Liu, Shanlin, Machida, R., Mashimo, Y., Misof, B., Niehuis, O., Peters, R. S., Petersen, M., Podsiadlowski, L., Schuette, K., Shimizu, S., Uchifune, T., Wilbrandt, J., Yan, E., Zhou, X. & Simon, S., 19 Feb 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 8, p. 3024-3029

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny

    Cappellini, Enrico, Welker, Frido, Pandolfi, L., Ramos Madrigal, Jazmin, Samodova-Sommer, Diana, Rüther, P. L., Fotaki, Anna Katerina, Lyon, D., Moreno Mayar, J. Víctor, Bukhsianidze, M., Rakownikow Jersie-Christensen, R., Mackie, M., Ginolhac, A., Ferring, R., Tappen, M., Palkopoulou, E., Dickinson, M. R., Stafford, T. W., Chan, Y. L., Götherström, A., Nathan, S. K. S. S., Heintzman, P. D., Kapp, J. D., Kirillova, I., Moodley, Y., Agusti, J., Kahlke, R. D., Kiladze, G., Martínez-Navarro, B., Liu, Shanlin, Sandoval-Velasco, Marcela, Sinding, Mikkel Holger Strander, Kelstrup, C. D., Allentoft, Morten Erik, Orlando, L., Penkman, K., Shapiro, B., Rook, L., Dalén, L., Gilbert, M Thomas P, Olsen, Jesper Velgaard, Lordkipanidze, D. & Willerslev, Eske, 2019, In: Nature. 574, 7776, p. 103-107

    Research output: Contribution to journalJournal articleResearchpeer-review

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ID: 143259847