Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts

Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

Standard

Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts. / Rasmussen, Jacob A.; Villumsen, Kasper R.; Duchêne, David A.; Puetz, Lara C.; Delmont, Tom O.; Sveier, Harald; Jørgensen, Louise von Gersdorff; Præbel, Kim; Martin, Michael D.; Bojesen, Anders M.; Gilbert, M. Thomas P.; Kristiansen, Karsten; Limborg, Morten T.

I: Communications Biology, Bind 4, 579, 2021.

Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

Harvard

Rasmussen, JA, Villumsen, KR, Duchêne, DA, Puetz, LC, Delmont, TO, Sveier, H, Jørgensen, LVG, Præbel, K, Martin, MD, Bojesen, AM, Gilbert, MTP, Kristiansen, K & Limborg, MT 2021, 'Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts', Communications Biology, bind 4, 579. https://doi.org/10.1038/s42003-021-02105-1

APA

Rasmussen, J. A., Villumsen, K. R., Duchêne, D. A., Puetz, L. C., Delmont, T. O., Sveier, H., Jørgensen, L. V. G., Præbel, K., Martin, M. D., Bojesen, A. M., Gilbert, M. T. P., Kristiansen, K., & Limborg, M. T. (2021). Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts. Communications Biology, 4, [579]. https://doi.org/10.1038/s42003-021-02105-1

Vancouver

Rasmussen JA, Villumsen KR, Duchêne DA, Puetz LC, Delmont TO, Sveier H o.a. Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts. Communications Biology. 2021;4. 579. https://doi.org/10.1038/s42003-021-02105-1

Author

Rasmussen, Jacob A. ; Villumsen, Kasper R. ; Duchêne, David A. ; Puetz, Lara C. ; Delmont, Tom O. ; Sveier, Harald ; Jørgensen, Louise von Gersdorff ; Præbel, Kim ; Martin, Michael D. ; Bojesen, Anders M. ; Gilbert, M. Thomas P. ; Kristiansen, Karsten ; Limborg, Morten T. / Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts. I: Communications Biology. 2021 ; Bind 4.

Bibtex

@article{9bc74391815447fda2094d3db7522657,
title = "Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts",
abstract = "Salmonids are important sources of protein for a large proportion of the human population. Mycoplasma species are a major constituent of the gut microbiota of salmonids, often representing the majority of microbiota. Despite the frequent reported dominance of salmonid-related Mycoplasma species, little is known about the phylogenomic placement, functions and potential evolutionary relationships with their salmonid hosts. In this study, we utilise 2.9 billion metagenomic reads generated from 12 samples from three different salmonid host species to I) characterise and curate the first metagenome-assembled genomes (MAGs) of Mycoplasma dominating the intestines of three different salmonid species, II) establish the phylogeny of these salmonid candidate Mycoplasma species, III) perform a comprehensive pangenomic analysis of Mycoplasma, IV) decipher the putative functionalities of the salmonid MAGs and reveal specific functions expected to benefit the host. Our data provide a basis for future studies examining the composition and function of the salmonid microbiota.",
author = "Rasmussen, {Jacob A.} and Villumsen, {Kasper R.} and Duch{\^e}ne, {David A.} and Puetz, {Lara C.} and Delmont, {Tom O.} and Harald Sveier and J{\o}rgensen, {Louise von Gersdorff} and Kim Pr{\ae}bel and Martin, {Michael D.} and Bojesen, {Anders M.} and Gilbert, {M. Thomas P.} and Karsten Kristiansen and Limborg, {Morten T.}",
year = "2021",
doi = "10.1038/s42003-021-02105-1",
language = "English",
volume = "4",
journal = "Communications Biology",
issn = "2399-3642",
publisher = "nature publishing group",

}

RIS

TY - JOUR

T1 - Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts

AU - Rasmussen, Jacob A.

AU - Villumsen, Kasper R.

AU - Duchêne, David A.

AU - Puetz, Lara C.

AU - Delmont, Tom O.

AU - Sveier, Harald

AU - Jørgensen, Louise von Gersdorff

AU - Præbel, Kim

AU - Martin, Michael D.

AU - Bojesen, Anders M.

AU - Gilbert, M. Thomas P.

AU - Kristiansen, Karsten

AU - Limborg, Morten T.

PY - 2021

Y1 - 2021

N2 - Salmonids are important sources of protein for a large proportion of the human population. Mycoplasma species are a major constituent of the gut microbiota of salmonids, often representing the majority of microbiota. Despite the frequent reported dominance of salmonid-related Mycoplasma species, little is known about the phylogenomic placement, functions and potential evolutionary relationships with their salmonid hosts. In this study, we utilise 2.9 billion metagenomic reads generated from 12 samples from three different salmonid host species to I) characterise and curate the first metagenome-assembled genomes (MAGs) of Mycoplasma dominating the intestines of three different salmonid species, II) establish the phylogeny of these salmonid candidate Mycoplasma species, III) perform a comprehensive pangenomic analysis of Mycoplasma, IV) decipher the putative functionalities of the salmonid MAGs and reveal specific functions expected to benefit the host. Our data provide a basis for future studies examining the composition and function of the salmonid microbiota.

AB - Salmonids are important sources of protein for a large proportion of the human population. Mycoplasma species are a major constituent of the gut microbiota of salmonids, often representing the majority of microbiota. Despite the frequent reported dominance of salmonid-related Mycoplasma species, little is known about the phylogenomic placement, functions and potential evolutionary relationships with their salmonid hosts. In this study, we utilise 2.9 billion metagenomic reads generated from 12 samples from three different salmonid host species to I) characterise and curate the first metagenome-assembled genomes (MAGs) of Mycoplasma dominating the intestines of three different salmonid species, II) establish the phylogeny of these salmonid candidate Mycoplasma species, III) perform a comprehensive pangenomic analysis of Mycoplasma, IV) decipher the putative functionalities of the salmonid MAGs and reveal specific functions expected to benefit the host. Our data provide a basis for future studies examining the composition and function of the salmonid microbiota.

U2 - 10.1038/s42003-021-02105-1

DO - 10.1038/s42003-021-02105-1

M3 - Journal article

C2 - 33990699

VL - 4

JO - Communications Biology

JF - Communications Biology

SN - 2399-3642

M1 - 579

ER -

ID: 260190878