Stefan Horst Sommer

Stefan Horst Sommer

Professor


  1. Udgivet

    A Function Space Perspective on Stochastic Shape Evolution

    Baker, Elizabeth Louise, Besnier, T. & Sommer, Stefan Horst, 2023, Image Analysis - 23rd Scandinavian Conference, SCIA 2023, Proceedings. Gade, R., Felsberg, M. & Kämäräinen, J-K. (red.). Springer, s. 278-292 15 s. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Bind 13886 LNCS).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  2. Udgivet

    A Geometric Framework for Stochastic Shape Analysis

    Arnaudon, A., Holm, D. D. & Sommer, Stefan Horst, 2019, I: Foundations of Computational Mathematics. 19, 3, s. 653–701 49 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  3. Udgivet

    A Memory-Efficient Parallelizable Method for Computation of Thévenin Equivalents Used in Real-Time Stability Assessment

    Jorgensen, C. H. L., Moller, J. G., Sommer, Stefan Horst & Johannsson, H., 2019, I: IEEE Transactions on Power Systems. 34, 4, s. 2675-2684 10 s., 8645670.

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  4. Udgivet

    A longitudinal study of growth, sex steroids and IGF-1 in boys with physiological gynaecomastia

    Mieritz, M. G., Raket, L. L., Hagen, C. P., Nielsen, J. E., Talman, M. M., Petersen, Jørgen Holm, Sommer, Stefan Horst, Main, Katharina Maria, Jørgensen, N. & Juul, Anders, 2015, I: Journal of Clinical Endocrinology and Metabolism. 100, 10, s. 3752-3759 8 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  5. Udgivet

    A multi-scale kernel bundle for LDDMM: towards sparse deformation description across space and scales

    Sommer, Stefan Horst, Nielsen, Mads, Lauze, Francois Bernard & Pennec, X., 2011, Information Processing in Medical Imaging: 22nd International Conference, IPMI 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings. Székely, G. & Hahn, H. K. (red.). Springer, s. 624-35 12 s. (Lecture notes in computer science, Bind 6801).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  6. Udgivet

    A nonlinear mixed-effects model for simultaneous smoothing and registration of functional data

    Raket, L. L., Sommer, Stefan Horst & Markussen, Bo, 2014, I: Pattern Recognition Letters. 38, s. 1-7 7 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  7. Udgivet

    A statistical model for simultaneous template estimation, bias correction, and registration of 3D brain images

    Pai, A. S. U., Sommer, Stefan Horst, Raket, L. L., Kühnel, L., Darkner, Sune, Sørensen, L. & Nielsen, Mads, 2017, Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging: MICCAI 2016 International Workshops, MCV and BAMBI, Athens, Greece, October 21, 2016, Revised Selected Papers. Müller, H., Kelm, B. M., Arbel, T., Cai, W., Cardoso, M. J., Langs, G., Menze, B., Metaxas, D., Montillo, A., Wells, W. M., Zhang, S., Chung, A. C. S., Jenkinson, M. & Ribbens, A. (red.). Springer, s. 151-159 9 s. (Lecture notes in computer science, Bind 10081).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  8. Udgivet

    A stochastic large deformation model for computational anatomy

    Arnaudon, A., Holm, D. D., Pai, A. S. U. & Sommer, Stefan Horst, 2017, Information Processing in Medical Imaging: 25th International Conference, IPMI 2017, Boone, NC, USA, June 25-30, 2017, Proceedings. Springer, s. 571-582 12 s. (Lecture notes in computer science, Bind 10265).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  9. Udgivet

    Accelerating multi-scale flows for LDDKBM diffeomorphic registration

    Sommer, Stefan Horst, 2011, 2011 IEEE International Conference on Computer Vision Workshops (ICCV Workshops). IEEE, s. 499-505 7 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  10. Udgivet

    Adaptive time-stepping in dieomorphic image registration with bounded inverse consistency error

    Pai, A. S. U., Klein, S., Sommer, Stefan Horst, Sørensen, L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Proceedings of the fifth international workshop on Mathematical Foundations of Computational Anatomy (MFCA 2015) . INRIA, s. 35-47

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  11. Udgivet

    Adaptive time-stepping in diffeomorphic image registration with bounded inverse consistency error

    Pai, A. S. U., Klein, S., Sommer, Stefan Horst, Sørensen, L. E. B. L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, The 18th International Conference on Medical Image Computing and Computer Assisted Intervention: proceedings. Technische Universität München , s. 35-47 13 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  12. Udgivet

    An Infinitesimal Probabilistic Model for Principal Component Analysis of Manifold Valued Data

    Sommer, Stefan Horst, 2019, I: Sankhya A. 81, 1, s. 37-62

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  13. Udgivet

    Anatomy in Curved Space: Non-linear Modeling of Deformation and Shape for Medical Imaging

    Sommer, Stefan Horst, 2012, Faculty of Science, University of Copenhagen.

    Publikation: Bog/antologi/afhandling/rapportPh.d.-afhandling

  14. Udgivet

    Anisotropic distributions on manifolds: template estimation and most probable paths

    Sommer, Stefan Horst, 2015, Information processing in medical imaging: 24th International Conference, IPMI 2015, Sabhal Mor Ostaig, Isle of Skye, UK, June 28 - July 3, 2015, Proceedings. Ourselin, S., Alexander, D. C., Westin, C-F. & Cardoso, M. J. (red.). Springer, s. 193-204 12 s. (Lecture notes in computer science, Bind 9123).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  15. Udgivet

    Anisotropically weighted and nonholonomically constrained evolutions on manifolds

    Sommer, Stefan Horst, 2016, I: Entropy. 18, 12, 21 s., 425.

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  16. Udgivet

    Atlas generative models and geodesic interpolation

    Stolberg-Larsen, J. & Sommer, Stefan Horst, 2022, I: Image and Vision Computing. 122, 23 s., 104433.

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  17. Udgivet

    Bicycle Chain Shape Models

    Sommer, Stefan Horst, Tatu, A. J., Chen, C., Jørgensen, D., de Bruijne, Marleen, Loog, M., Nielsen, Mads & Lauze, Francois Bernard, 2009, Computer Vision and Pattern Recognition Workshops, 2009. CVPR Workshops 2009. IEEE Computer Society Conference on Computer Vision and Pattern Recognition.. IEEE, s. 157-163 7 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  18. Udgivet

    Binary Search and Fit Algorithm for Improved Voltage Stability Boundary Monitoring

    Jørgensen, C. H. L., Karatas, B. C., Jóhannsson, H. & Sommer, Stefan Horst, 2019, Proceedings of 2019 IEEE PES Innovative Smart Grid Technologies Europe, ISGT-Europe 2019. IEEE, 5 s. 8905466

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  19. Udgivet

    Biomedical Image Registration: 8th International Workshop, WBIR 2018, Leiden, The Netherlands, June 28-29, 2018, Proceedings

    Klein, S. (red.), Staring, M. (red.), Durrleman, S. (red.) & Sommer, Stefan Horst (red.), 2018, Springer. 127 s. (Image Processing, Computer Vision, Pattern Recognition, and Graphics, Bind 10883).

    Publikation: Bog/antologi/afhandling/rapportAntologifagfællebedømt

  20. Udgivet

    Brain Segmentation in Rodent MR-Images Using Convolutional Neural Networks

    Sigurdsson, B., Darkner, Sune, Sommer, Stefan Horst, Mortensen, K. N., Sanggaard, S., Kostrikov, S. & Nedergaard, Maiken, 2018.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskningfagfællebedømt

  21. Udgivet

    Bridge Simulation and Metric Estimation on Lie Groups

    Højgaard Jensen, M., Joshi, S. & Sommer, Stefan Horst, 2021, Geometric Science of Information: 5th International Conference, GSI 2021, Paris, France, July 21–23, 2021, Proceedings. Springer, s. 430-438 (Lecture Notes in Computer Science, Bind 12829).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  22. Udgivet

    Bridge simulation and metric estimation on landmark manifolds

    Sommer, Stefan Horst, Arnaudon, A., Kühnel, L. & Joshi, S., 2017, Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics: First International Workshop, GRAIL 2017, 6th International Workshop, MFCA 2017, and Third International Workshop, MICGen 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings. Cardoso, J., Arbel, T., Ferrante, E., Pennec, X., Dalca, A., Parisot, S., Batmanghelich, N. K., Sotiras, A., Nielsen, M., Sabuncu, M. R., Fletcher, T., Shen, L., Durrleman, S. & Sommer, S. (red.). Springer, s. 79-91 13 s. (Lecture notes in computer science, Bind 10551).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  23. Udgivet

    Characterization of errors in deep learning-based brain MRI segmentation

    Pai, A. S. U., Teng, Y., Blair, J. P. M., Kallenberg, M. G. J., Dam, Erik Bjørnager, Sommer, Stefan Horst, Igel, Christian & Nielsen, Mads, 2017, Deep learning for medical image analysis. Zhou, S. K., Greenspan, H. & Shen, D. (red.). Academic Press, s. 223–242 20 s.

    Publikation: Bidrag til bog/antologi/rapportBidrag til bog/antologiForskningfagfællebedømt

  24. Udgivet

    Combining the boundary shift integral and tensor-based morphometry for brain atrophy estimation

    Michalkiewicz, M. D., Pai, A. S. U., Leung, K. K., Sommer, Stefan Horst, Darkner, Sune, Sørensen, L., Sporring, Jon & Nielsen, Mads, 2016, Medical imaging 2016: Image processing. Styner, M. A. & Angelini, E. D. (red.). SPIE - International Society for Optical Engineering, 6 s. 978406. (Progress in Biomedical Optics and Imaging).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  25. Udgivet

    Comparison of several computational pipelines for atrophy computation in longitudinal Alzheimers studies

    Pai, A. S. U., Sommer, Stefan Horst, Darkner, Sune, Sørensen, L. E. B. L., Sporring, Jon & Nielsen, Mads, 2015. 1 s.

    Publikation: KonferencebidragKonferenceabstrakt til konferenceForskningfagfællebedømt

  26. Udgivet

    Computational anatomy in Theano

    Kühnel, L. & Sommer, Stefan Horst, 2017, Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics: First International Workshop, GRAIL 2017, 6th International Workshop, MFCA 2017, and Third International Workshop, MICGen 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings. Cardoso, J., Arbel, T., Ferrante, E., Pennec, X., Dalca, A., Parisot, S., Joshi, S., Batmanghelich, N. K., Sotiras, A., Nielsen, M., Sabuncu, M. R., Fletcher, T., Shen, L., Durrleman, S. & Sommer, S. (red.). Springer, s. 164-176 13 s. (Lecture notes in computer science, Bind 10551).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  27. Udgivet

    Currents and K-functions for Fiber Point Processes

    Hansen, P. E. H., Waagepetersen, R. P., Svane, A. M., Sporring, Jon, Stephensen, Hans Jacob Teglbjærg, Hasselholt, S. & Sommer, Stefan Horst, 2021, Geometric Science of Information: 5th International Conference, GSI 2021, Paris, France, July 21–23, 2021, Proceedings. Nielsen, F. & Barbaresco, F. (red.). Springer, s. 127-134 (Lecture Notes in Computer Science, Bind 12829).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  28. Udgivet

    Currents and K-functions for Fiber Point Processes

    Hansen, P. E. H., Waagepetersen, R. P., Svane, A. M., Sporring, Jon, Stephensen, Hans Jacob Teglbjærg, Hasselholt, S. & Sommer, Stefan Horst, 2021, arXiv preprint. 12 s.

    Publikation: Bog/antologi/afhandling/rapportRapport

  29. Udgivet

    Diffeomorphic image registration with automatic time-step adjustment

    Pai, A. S. U., Klein, S., Sommer, Stefan Horst, Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI). IEEE, s. 1085-1088 4 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  30. Udgivet

    Differential geometry and stochastic dynamics with deep learning numerics

    Kühnel, L., Sommer, Stefan Horst & Arnaudon, A., 2019, I: Applied Mathematics and Computation. 356, s. 411-437 27 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  31. Udgivet

    Diffusion Bridges for Stochastic Hamiltonian Systems and Shape Evolutions

    Arnaudon, A., Van Der Meulen, F., Schauer, M. & Sommer, Stefan Horst, 2022, I: SIAM Journal on Imaging Sciences. 15, 1, s. 293-323

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  32. Udgivet

    Diffusion Means and Heat Kernel on Manifolds

    Hansen, P., Eltzner, B. & Sommer, Stefan Horst, 2021, Geometric Science of Information: 5th International Conference, GSI 2021, Paris, France, July 21–23, 2021, Proceedings. Springer, s. 111-118 (Lecture Notes in Computer Science, Bind 12829).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  33. Udgivet

    Diffusion means in geometric spaces

    Eltzner, B., Hansen, P. E. H., Huckemann, S. F. & Sommer, Stefan Horst, 2023, I: Bernoulli. 29, 4, s. 3141-3170 30 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  34. Udgivet

    Discrete-Time Observations of Brownian Motion on Lie Groups and Homogeneous Spaces: Sampling and Metric Estimation

    Jensen, M. H., Joshi, S. & Sommer, Stefan Horst, 2022, I: Algorithms. 15, 8, s. 1-17 290.

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  35. Udgivet

    Do dementia biomarkers have a sigmoid trajectory? Insights from non-linear mixed effects modeling

    Pai, A. S. U., Sommer, Stefan Horst, Raket, L. L., Sørensen, L. & Nielsen, Mads, 2016, I: Alzheimer's & Dementia. 12, 7, Supplement, s. P356 1 s., O4-09-06.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskriftfagfællebedømt

  36. Udgivet

    Evolution equations with anisotropic distributions and diffusion PCA

    Sommer, Stefan Horst, 2015, Geometric science of information: Second International Conference, GSI 2015, Palaiseau, France, October 28–30, 2015, Proceedings. Nielsen, F. & Barbaresco, F. (red.). Springer Science+Business Media, s. 3-11 9 s. (Lecture notes in computer science, Bind 9389).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  37. Udgivet

    Gaussian-like spatial priors for articulated tracking

    Hauberg, S., Sommer, Stefan Horst & Steenstrup Pedersen, Kim, 2010, Computer Vision - ECCV 2010: 11th European Conference on Computer Vision, Heraklion, Crete, Greece, September 5-11, 2010, Proceedings, Part I. Daniilidis, K., Maragos, P. & Paragios, N. (red.). Springer, Bind Part I. s. 425-437 13 s. (Lecture notes in computer science; Nr. 6311).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  38. Udgivet

    Generalizations of Ripley’s K-function with Application to Space Curves

    Sporring, Jon, Waagepetersen, R. P. & Sommer, Stefan Horst, jun. 2019, Information Processing in Medical Imaging - 26th International Conference, IPMI 2019, Hong Kong, China, 2019, Proceedings: 26th International Conference, IPMI 2019, Hong Kong, China, June 2–7, 2019, Proceedings. Springer, s. 731-742 (Lecture Notes in Computer Science, Bind 11492).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  39. Udgivet

    Geometry of sample spaces

    Harms, P., Michor, P. W., Pennec, X. & Sommer, Stefan Horst, 2023, I: Differential Geometry and its Application. 90, 29 s., 102029.

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  40. Udgivet

    Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics: First International Workshop, GRAIL 2017, 6th International Workshop, MFCA 2017, and Third International Workshop, MICGen 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings

    Cardoso, M. J. (red.), Arbel, T. (red.), Ferrante, E. (red.), Pennec, X. (red.), Dalca, A. V., Parisot, S. (red.), Joshi, S. (red.), Batmanghelich, N. K. (red.), Sotiras, A. (red.), Nielsen, Mads (red.), Sabuncu, M. R. (red.), Fletcher, T. (red.), Shen, L. (red.), Durrleman, S. (red.) & Sommer, Stefan Horst (red.), 2017, Springer. 248 s. (Lecture notes in computer science, Bind 10551).

    Publikation: Bog/antologi/afhandling/rapportAntologifagfællebedømt

  41. Udgivet

    Higher-order momentum distributions and locally affine LDDMM registration

    Sommer, Stefan Horst, Nielsen, Mads, Darkner, Sune & Pennec, X., 2013, I: S I A M Journal on Imaging Sciences. 6, 1, s. 341-367 27 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  42. Udgivet

    Higher-order spatial accuracy in diffeomorphic image registration

    Jacobs, H. O. & Sommer, Stefan Horst, 2014, I: Geometry, Imaging and Computing. 1, 4, s. 447-484 38 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  43. Udgivet

    Hippocampal texture predicts rate of cognitive decline in mild cognitive impairment

    Pai, A. S. U., Pillai, J. A., Sørensen, L., Darkner, Sune, Sommer, Stefan Horst & Nielsen, Mads, jul. 2017, I: Alzheimer's & Dementia. 13, 7, supplement, s. P1356 1 s., P4-225.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  44. Udgivet

    Horizontal Flows and Manifold Stochastics in Geometric Deep Learning

    Sommer, Stefan Horst & Bronstein, A. M., 2021, I: IEEE Transactions on Pattern Analysis and Machine Intelligence. 44, 2, s. 811 - 822

    Publikation: Bidrag til tidsskriftTidsskriftartikelfagfællebedømt

  45. Udgivet

    Horizontal dimensionality reduction and iterated frame bundle development

    Sommer, Stefan Horst, 2013, Geometric Science of Information: First International Conference, GSI 2013, Paris, France, August 28-30, 2013. Proceedings. Nielsen, F. & Barbaresco, F. (red.). Springer, s. 76-83 8 s. (Lecture notes in computer science, Bind 8085).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  46. Udgivet

    ICLR 2022 Challenge for Computational Geometry & Topology: Design and Results

    Myers, A., Sanborn, S., Donnat, C. D. & Sommer, Stefan Horst, 2022. 8 s.

    Publikation: KonferencebidragPaperForskning

  47. Udgivet

    Image registration using stationary velocity fields parameterized by norm-minimizing Wendland kernel

    Pai, A. S. U., Sommer, Stefan Horst, Sørensen, L., Darkner, Sune, Sporring, Jon & Nielsen, Mads, 2015, Medical Imaging 2015: Image Processing. SPIE - International Society for Optical Engineering, 7 s. (Proceedings of S P I E - International Society for Optical Engineering, Bind 9413).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  48. Udgivet

    Information Processing in Medical Imaging: 27th International Conference, IPMI 2021, Virtual Event, June 28–June 30, 2021, Proceedings

    Feragen, A. (red.), Sommer, Stefan Horst (red.), Schnabel, J. (red.) & Nielsen, Mads (red.), 2021, Springer. 782 s. (Lecture Notes in Computer Science, Bind 12729).

    Publikation: Bog/antologi/afhandling/rapportAntologifagfællebedømt

  49. Udgivet

    Instance-Specific Augmentation of Brain MRIs with Variational Autoencoders

    Middleton, Jon Anthony, Bauer, Marko, Johansen, Jacob, Nielsen, Mads, Sommer, Stefan Horst & Pai, A. S. U., 2023, Medical Applications with Disentanglements : First MICCAI Workshop, MAD 2022, Held in Conjunction with MICCAI 2022, Singapore, September 22, 2022, Proceedings. Springer, s. 49-58 (Lecture Notes in Computer Science, Bind 13823).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  50. Udgivet

    Introduction

    Pennec, X., Sommer, Stefan Horst & Fletcher, T., 2020, Riemannian Geometric Statistics in Medical Image Analysis. Pennec, X., Sommer, S. & Fletcher, T. (red.). Academic Press, s. xvii-xix

    Publikation: Bidrag til bog/antologi/rapportForord/efterskriftForskningfagfællebedømt

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