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Mads Nielsen

Mads Nielsen

Professor

Medlem af:


  1. 2018
  2. E-pub ahead of print

    Subclinical depressive symptoms during late midlife and structural brain alterations : a longitudinal study of Danish men born in 1953. / Osler, Merete; Sørensen, Lauge; Rozing, Maarten; Calvo, Oriol Puig; Nielsen, Mads; Rostrup, Egill.

    I: Human Brain Mapping, 2018.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  3. Accepteret/In press

    Ensemble support vector machine classification of dementia using structural MRI and mini-mental state examination. / Sørensen, Lauge; Nielsen, Mads.

    I: Journal of Neuroscience Methods, 2018.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  4. 2017
  5. Udgivet

    Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics : First International Workshop, GRAIL 2017, 6th International Workshop, MFCA 2017, and Third International Workshop, MICGen 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings. / Cardoso, M. Jorge (Redaktør); Arbel, Tal (Redaktør); Ferrante, Enzo (Redaktør); Pennec, Xavier (Redaktør); Dalca, Adrian V.; Parisot, Sarah (Redaktør); Joshi, Sarang (Redaktør); Batmanghelich, Nematollah K. (Redaktør); Sotiras, Aristeidis (Redaktør); Nielsen, Mads (Redaktør); Sabuncu, Mert R. (Redaktør); Fletcher, Tom (Redaktør); Shen, Li (Redaktør); Durrleman, Stanley (Redaktør); Sommer, Stefan Horst (Redaktør).

    Springer, 2017. 248 s.

    Publikation: Bog/antologi/afhandling/rapportAntologi

  6. Udgivet

    Density-based non-rigid registration of diffusion-weighted images. / Jensen, Henrik Grønholt; Lauze, Francois Bernard; Nielsen, Mads; Darkner, Sune.

    2017. Abstract fra 25th ISMRM Annual Meeting, Honolulu, USA.

    Publikation: KonferencebidragKonferenceabstrakt til konference

  7. Udgivet

    Convolutional neural networks for segmentation and object detection of human semen. / Nissen, Malte Stær; Krause, Oswin; Almstrup, Kristian; Kjærulff, Søren; Nielsen, Torben T.; Nielsen, Mads.

    Image Analysis: 20th Scandinavian Conference, SCIA 2017, Tromsø, Norway, June 12–14, 2017, Proceedings, Part I. red. / Puneet Sharma; Filippo Maria Bianchi. Bind Part 1 Springer, 2017. s. 397-406.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedings

  8. Udgivet

    A statistical model for simultaneous template estimation, bias correction, and registration of 3D brain images. / Pai, Akshay Sadananda Uppinakudru; Sommer, Stefan Horst; Raket, Lars Lau; Kühnel, Line; Darkner, Sune; Sørensen, Lauge; Nielsen, Mads.

    Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging: MICCAI 2016 International Workshops, MCV and BAMBI, Athens, Greece, October 21, 2016, Revised Selected Papers. red. / Henning Müller; B. Michael Kelm; Tal Arbel; Weidong Cai; M. Jorge Cardoso; Georg Langs; Bjoern Menze; Dmitris Metaxas; Albert Montillo; William M. Wells; Shaoting Zhang; Albert C. S. Chung; Mark Jenkinson; Annemie Ribbens. Springer, 2017. s. 151-159.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedings

  9. Udgivet

    Characterization of errors in deep learning-based brain MRI segmentation. / Pai, Akshay Sadananda Uppinakudru; Teng, Yuan-Ching; Blair, Joseph Patrick Michele; Kallenberg, Michiel Gijsbertus J.; Dam, Erik Bjørnager; Sommer, Stefan Horst; Igel, Christian; Nielsen, Mads.

    Deep learning for medical image analysis. red. / S. Kevin Zhou; Hayit Greenspan; Dinggang Shen. Academic Press, 2017. s. 223–242.

    Publikation: Bidrag til bog/antologi/rapportBidrag til bog/antologi

  10. Udgivet

    Hippocampal texture predicts rate of cognitive decline in mild cognitive impairment. / Pai, Akshay Sadananda Uppinakudru; Pillai, Jagan A.; Sørensen, Lauge; Darkner, Sune; Sommer, Stefan Horst; Nielsen, Mads.

    I: Alzheimer's & Dementia, Bind 13, Nr. 7, supplement, P4-225, 07.2017, s. P1356.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  11. Udgivet
  12. Udgivet
  13. 2016
  14. Udgivet

    Learning density independent texture features. / Kallenberg, Michiel Gijsbertus J.; Nielsen, Mads; Holland, Katharina; Karssemeijer, Nico; Igel, Christian; Lillholm, Martin.

    Breast Imaging: 13th International Workshop, IWDM 2016, Malmö, Sweden, June 19-22, 2016, Proceedings. red. / Anders Tingberg; Kristina Lång; Pontus Timberg. Springer, 2016. s. 299-306.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedings

  15. Udgivet

    Unsupervised deep learning applied to breast density segmentation and mammographic risk scoring. / Kallenberg, Michiel Gijsbertus J.; Petersen, Peter Kersten; Nielsen, Mads; Ng, Andrew Y.; Diao, Pengfei; Igel, Christian; Vachon, Celine M.; Holland, Katharina; Winkel, Rikke Rass; Karssemeijer, Nico; Lillholm, Martin.

    I: IEEE Transactions on Medical Imaging, Bind 35, Nr. 5, 2016, s. 1322-1331.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  16. Udgivet

    Supervised hub-detection for brain connectivity. / Kasenburg, Niklas; Liptrot, Matthew George; Reislev, Nina Linde; Garde, Ellen; Nielsen, Mads; Feragen, Aasa.

    Medical Imaging 2016: Image Processing. red. / Martin A. Styner; Elsa D. Angelini. SPIE - International Society for Optical Engineering, 2016. 978409.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedings

  17. Udgivet

    Training shortest-path tractography : automatic learning of spatial priors. / Kasenburg, Niklas; Liptrot, Matthew George; Reislev, Nina Linde; Ørting, Silas Nyboe; Nielsen, Mads; Garde, Ellen; Feragen, Aasa.

    I: NeuroImage, Bind 130, 2016, s. 63-76.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  18. Udgivet

    Combining the boundary shift integral and tensor-based morphometry for brain atrophy estimation. / Michalkiewicz, Mateusz Dawid; Pai, Akshay Sadananda Uppinakudru; Leung, Kelvin K.; Sommer, Stefan Horst; Darkner, Sune; Sørensen, Lauge; Sporring, Jon; Nielsen, Mads.

    Medical imaging 2016: Image processing. red. / Martin A. Styner; Elsa D. Angelini. SPIE - International Society for Optical Engineering, 2016. 978406.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedings

  19. Udgivet

    Deformation-based atrophy computation by surface propagation and its application to Alzheimer’s disease. / Pai, Akshay Sadananda Uppinakudru; Sporring, Jon; Darkner, Sune; Dam, Erik Bjørnager; Lillholm, Martin; Jørgensen, Dan; Oh, Joonmi; Chen, Gennan; Suhy, Joyce; Sørensen, Lauge; Nielsen, Mads.

    I: SPIE Journal of Medical Imaging, Bind 3, Nr. 1, 014005, 2016.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  20. Udgivet

    Do dementia biomarkers have a sigmoid trajectory? Insights from non-linear mixed effects modeling. / Pai, Akshay Sadananda Uppinakudru; Sommer, Stefan Horst; Raket, Lars Lau; Sørensen, Lauge; Nielsen, Mads.

    I: Alzheimer's & Dementia, Bind 12, Nr. 7, Supplement, O4-09-06, 2016, s. P356.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  21. Udgivet
  22. Udgivet

    Early detection of Alzheimer's disease using MRI hippocampal texture. / Sørensen, Lauge; Igel, Christian; Hansen, Naja Liv; Osler, Merete; Lauritzen, Martin; Rostrup, Egill; Nielsen, Mads.

    I: Human Brain Mapping, Bind 37, Nr. 3, 2016, s. 1148-1161.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  23. Udgivet

    MCI trial enrichment using MRI hippocampus texture. / Sørensen, Lauge; Igel, Christian; Nielsen, Mads.

    I: Alzheimer's & Dementia, Bind 12, Nr. 7, Supplement, IC-P-146, 2016, s. P108–P109.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  24. Udgivet

    Mammographic density and structural features can individually and jointly contribute to breast cancer risk assessment in mammography screening : a case-control study. / Winkel, Rikke Rass; von Euler-Chelpin, My Catarina; Nielsen, Mads; Petersen, Peter Kersten; Lillholm, Martin; Nielsen, Michael Bachmann; Lynge, Elsebeth; Uldall, Wei Yao; Vejborg, Ilse Merete Munk.

    I: B M C Cancer, Bind 16, 414, 2016.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  25. 2015
  26. Udgivet

    Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI : The CADDementia challenge. / Bron, Esther E.; Smits, Marion; van der Flier, Wiesje M.; Vrenken, Hugo; Barkhof, Frederik; Scheltens, Philip; Papma, Janne M.; Steketee, Rebecca M.E.; Méndez Orellana, Carolina; Meijboom, Rozanna; Pinto, Madalena; Meireles, Joana R.; Garrett, Carolina; Bastos-Leite, António J.; Abdulkadir, Ahmed; Ronneberger, Olaf; Amoroso, Nicola; Bellotti, Roberto; Cárdenas-Peña, David; Álvarez-Meza, Andrés M.; Dolph, Chester V.; Iftekharuddin, Khan M.; Eskildsen, Simon Fristed; Coupé, Pierrick; Fonov, Vladimir S.; Franke, Katja; Gaser, Christian; Ledig, Christian; Guerrero, Ricardo; Tong, Tong; Gray, Katherine R.; Moradi, Elaheh; Tohka, Jussi; Routier, Alexandre; Durrleman, Stanley; Sarica, Alessia; Di Fatta, Giuseppe; Sensi, Francesco; Chincarini, Andrea; Smith, Garry M.; Stoyanov, Zhivko V.; Sørensen, Lauge Emil Borch Laurs; Nielsen, Mads; Tangaro, Sabina; Inglese, Paolo; Wachinger, Christian; Reuter, Martin; van Swieten, John C.; Niessen, Wiro J.; Klein, Stefan.

    I: NeuroImage, Bind 111, 2015, s. 562-579.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  27. Udgivet

    Automatic segmentation of high-and low-field knee MRIs using knee image quantification with data from the osteoarthritis initiative. / Dam, Erik Bjørnager; Lillholm, Martin; Marques, Joselene; Nielsen, Mads.

    I: SPIE Journal of Medical Imaging, Bind 2, Nr. 2, 024001, 2015.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  28. Udgivet

    Locally orderless registration for diffusion weighted images. / Jensen, Henrik Grønholt; Lauze, Francois Bernard; Nielsen, Mads; Darkner, Sune.

    Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2015: 18th international conference, Munich, Germany, October 5-9, 2015, Proceedings, Part II. red. / Nassir Navab; Joachim Hornegger; William M. Wells; Alejandro F. Frangi. Springer, 2015. s. 305-312.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedings

  29. Udgivet

    Multimodal brain extraction from structural MRI using co-registered FDG-PET. / Jensen, Henrik Grønholt; Federspiel, Frederik Vilhelm Koch; Ptito, Maurice; Nielsen, Mads; Gjedde, Albert; Keller, Sune Høgild; Law, Ian; Kupers, Ron; Darkner, Sune.

    2015. Paper præsenteret ved Computational Methods for Molecular Imaging (CMMI) 2015, .

    Publikation: KonferencebidragPaper

  30. Udgivet

    Assessing breast cancer masking risk in full field digital mammography with automated texture analysis. / Kallenberg, Michiel Gijsbertus J; Lillholm, Martin; Diao, Pengfei; Holland, Katharina; Karssemeijer, Nico; Igel, Christian; Nielsen, Mads.

    7th International Workshop on Breast Densitometry and Cancer Risk Assessment (Non-CME). University of California, 2015. s. 109.

    Publikation: Bidrag til bog/antologi/rapportKonferenceabstrakt i proceedings

  31. Udgivet

    Assessing breast cancer masking risk with automated texture analysis in full field digital mammography. / Kallenberg, Michiel Gijsbertus J; Lillholm, Martin; Diao, Pengfei; Petersen, Kersten; Holland, Katharina; Karssemeijer, Nico; Igel, Christian; Nielsen, Mads.

    Breast Imaging and Interventional. Radiological Society of North America, Inc, 2015. s. 218.

    Publikation: Bidrag til bog/antologi/rapportKonferenceabstrakt i proceedings

  32. Udgivet

    Automated texture scoring for assessing breast cancer masking risk in full field digital mammography. / Kallenberg, Michiel Gijsbertus J; Petersen, Peter Kersten; Lillholm, Martin; Jørgensen, Dan Richter; Diao, Pengfei; Holland, Katharina; Karssemeijer, Nico; Igel, Christian; Nielsen, Mads.

    I: Insights into Imaging, Bind 6, Nr. 1, Supplement, B-0212, 2015.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  33. Udgivet

    Hippocampal texture predicts ad conversion in amyloid positive mild cognitively impaired subjects. / Nielsen, Mads; Igel, Christian; Sørensen, Lauge.

    I: Neurodegenerative Diseases, Bind 15, Nr. Suppl. 1, ADPD5-0947, 2015, s. 262.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  34. Udgivet

    Hippocampus MRI T1 texture's relation to established Alzheimer's disease biomarkers and prediction of progression. / Nielsen, Mads; Sørensen, Lauge; Pai, Akshay Sadananda Uppinakudru; Igel, Christian; Lillholm, Martin.

    2015. Abstract fra 101st Scientific Assembly and Annual Meeting of the Radiological Society of North America , Chicago, USA.

    Publikation: KonferencebidragKonferenceabstrakt til konference

  35. Udgivet

    Relevance sampling. / Nielsen, Mads; Markussen, Bo; Loog, Marco.

    Proceedings of the Eight Workshop on Information Theoretic Methods in Science and Engineering. red. / Jorma Rissanen; Peter Harremoës; Søren Forchhammer; Teemu Roos; Petri Myllymäki. Department of Computer Science, University of Helsinki , 2015. s. 35-38.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedings

  36. Udgivet

    Adaptive time-stepping in diffeomorphic image registration with bounded inverse consistency error. / Pai, Akshay Sadananda Uppinakudru; Klein, Stefan; Sommer, Stefan Horst; Sørensen, Lauge Emil Borch Laurs; Darkner, Sune; Sporring, Jon; Nielsen, Mads.

    The 18th International Conference on Medical Image Computing and Computer Assisted Intervention: proceedings. Technische Universität München , 2015. s. 35-47.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedings

  37. Udgivet

    Comparison of several computational pipelines for atrophy computation in longitudinal Alzheimers studies. / Pai, Akshay Sadananda Uppinakudru; Sommer, Stefan Horst; Darkner, Sune; Sørensen, Lauge Emil Borch Laurs; Sporring, Jon; Nielsen, Mads.

    2015. Abstract fra 101st Scientific Assembly and Annual Meeting of the Radiological Society of North America , Chicago, USA.

    Publikation: KonferencebidragKonferenceabstrakt til konference

  38. Udgivet

    Diffeomorphic image registration with automatic time-step adjustment. / Pai, Akshay Sadananda Uppinakudru; Klein, S.; Sommer, Stefan Horst; Darkner, Sune; Sporring, Jon; Nielsen, Mads.

    Biomedical Imaging (ISBI), 2015 IEEE 12th International Symposium on. IEEE, 2015. s. 1085-1088.

    Publikation: Bidrag til bog/antologi/rapportBidrag til bog/antologi

  39. Udgivet
  40. Udgivet

    Hippocampal MRI texture is related to hippocampal glucose metabolism. / Sørensen, Lauge; Pai, Akshay Sadananda Uppinakudru; Igel, Christian; Nielsen, Mads.

    I: Alzheimer's & Dementia, Bind 11, Nr. 7, Supplement, IC-P-077, 2015, s. P55-P56.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  41. Udgivet
  42. Udgivet
  43. 2014
  44. Udgivet

    Alzheimer's disease diagnostic performance of a multi-atlas hippocampal segmentation method using the harmonized hippocampal protocol. / Anker, Cecilie; Sørensen, Lauge; Pai, Akshay Sadananda Uppinakudru; Lyksborg, Mark; Lillholm, Martin; Conradsen, Knut; Larsen, Rasmus; Nielsen, Mads.

    2014. Abstract fra Radiological Society of North America 100th Scientific Assembly and Annual Meeting, Chicago, USA.

    Publikation: KonferencebidragKonferenceabstrakt til konference

  45. Udgivet

    Automated hippocampal segmentation using new standardized manual segmentations from the harmonized hippocampal protocol. / Anker, Cecilie; Pai, Akshay Sadananda Uppinakudru; Sørensen, Lauge; Lyksborg, Mark; Conradsen, Knut; Larsen, Rasmus; Nielsen, Mads.

    I: Alzheimer's & Dementia, Bind 10, Nr. 4, Supplement, P1-288, 2014, s. P415-P416.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  46. Udgivet

    Automated hippocampal segmentation using new standardized manual segmentations from the harmonized hippocampal protocol. / Anker, Cecilie; Pai, Akshay Sadananda Uppinakudru; Sørensen, Lauge; Lyksborg, Mark; Conradsen, Knut; Larsen, Rasmus; Nielsen, Mads.

    I: Alzheimer's & Dementia, Bind 10, Nr. 4, Supplement, IC-P-058, 2014, s. P33.

    Publikation: Bidrag til tidsskriftKonferenceabstrakt i tidsskrift

  47. Udgivet

    Breast tissue segmentation from x-ray radiographs. / Chen, Chen; Nielsen, Mads; Karssemeijer, Nico; Brandt, Sami Sebastian.

    I: Physics in Medicine and Biology, Bind 59, Nr. 10, 2014, s. 2445-2456.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  48. Udgivet

    Brain region's relative proximity as marker for Alzheimer's disease based on structural MRI. / Erleben, Lene Lillemark; Sørensen, Lauge Emil; Pai, Akshay Sadananda Uppinakudru; Dam, Erik Bjørnager; Nielsen, Mads; Initiative, Alzheimer's Disease Neuroimaging.

    I: BMC Medical Imaging, Bind 14, Nr. 1, 21, 2014.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  49. Udgivet

    Geometry and statistics : manifolds and stratified spaces. / Feragen, Aasa; Nielsen, Mads; Jensen, Eva Bjørn Vedel; Plessis, Andrew du; Lauze, Francois Bernard.

    I: Journal of Mathematical Imaging and Vision, Bind 50, Nr. 1, 2014, s. 1-4.

    Publikation: Bidrag til tidsskriftLeder

  50. Udgivet

    A method to determine the mammographic regions that show early changes due to the development of breast cancer. / Karemore, Gopal; Nielsen, Mads; Karssemeijer, Nico; Brandt, Sami Sebastian.

    I: Physics in Medicine and Biology, Bind 59, Nr. 22, 2014, s. 6759-6773.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  51. Udgivet

    Graph-based fibre tractography computing shortest paths between regions of interest. / Kasenburg, Niklas; Liptrot, Matthew George; Borgwardt, Karsten; Ørting, Silas Nyboe; Nielsen, Mads; Feragen, Aasa.

    2014. Abstract fra Joint Annual Meeting ISMRM-ESMRMB 2014, Milano, Italien.

    Publikation: KonferencebidragKonferenceabstrakt til konference

  52. Udgivet

    Mammographic texture resemblance generalizes as an independent risk factor for breast cancer. / Nielsen, Mads; Vachon, Celine M.; Scott, Christopher G.; Chernoff, Konstantin; Karemore, Gopal; Karssemeijer, Nico; Lillholm, Martin; Karsdal, Morten.

    I: Breast Cancer Research (Online Edition), Bind 16, Nr. 2, R37, 2014.

    Publikation: Bidrag til tidsskriftTidsskriftartikel

  53. Udgivet
  54. Udgivet
  55. Udgivet

    Stepwise inverse consistent Euler’s scheme for diffeomorphic image registration. / Pai, Akshay Sadananda Uppinakudru; Sommer, Stefan Horst; Darkner, Sune; Sørensen, Lauge; Sporring, Jon; Nielsen, Mads.

    Biomedical Image Registration: 6th International Workshop, WBIR 2014, London, UK, July 7-8, 2014. Proceedings. red. / Sébastien Ourselin; Marc Modat. Springer, 2014. s. 223-230.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedings

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